Shinella zoogloeoides: K8M09_16525
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Entry
K8M09_16525 CDS
T07727
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00270
Cysteine and methionine metabolism
szo00450
Selenocompound metabolism
szo00670
One carbon pool by folate
szo01100
Metabolic pathways
szo01110
Biosynthesis of secondary metabolites
szo01230
Biosynthesis of amino acids
szo04980
Cobalamin transport and metabolism
szo04981
Folate transport and metabolism
Module
szo_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
K8M09_16525 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
K8M09_16525 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K8M09_16525 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K8M09_16525 (metH)
04980 Cobalamin transport and metabolism
K8M09_16525 (metH)
Enzymes [BR:
szo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
K8M09_16525 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
DUF1129
Motif
Other DBs
NCBI-ProteinID:
UEX81165
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All DBs
Position
3358922..3362713
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AA seq
1263 aa
AA seq
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MANSPLDALFGPEQPPRDGKEIRAALEAAARERILVLDGAMGTEIQTLKLVEEDFRGDRF
GDCACHQQGNNDLLTLTQPGAIEDIHYRYALAGADILETNTFSSTTIAQADYGMEDMVYE
LNRDGARLARRAGLRAQQKDGRRRFVAGALGPTNRTASISPDVNNPGYRAVTFDNLRTAY
ADQVRGLIDGGADIILIETIFDTLNAKAAIFATREVFEEKGIDLPVMISGTITDLSGRTL
SGQTPEAFWNSVRHADPFSIGLNCALGANAMRAHLAEISSVAQTFVCAYPNAGLPNAFGL
YDETPEEMAAQIEGFMRDGLVNVVGGCCGSTPDHIRAIAEAAARHKPRKIPDIPRHMRLS
GLEPFTLTEAIPFVNVGERTNVTGSAKFRKLITAGDYAAALDVARDQVANGAQIIDINMD
EGLIDSGRAMTEYLNLVAAEPDIARVPVMIDSSKWEVIEAGLKCVQGKPLVNSISLKEGE
EAFLHHAKLVRAYGAAVVVMAFDETGQADTKARKVEICTRAYKLLTEVAGLAPEDIVFDP
NIFAVATGIEEHDNYGVDFIEATRDITATLPHVHISGGVSNLSFSFRGNEPVREAMHAVF
LYHAIQAGMDMGIVNAGQLAVYDTIEPELREACEDVVLNRVPKAGGTATERMLEIAERFK
GAGGKEAKERDLAWREWPVEKRLEHALVNGITEFVEEDTEEARQNAERPLHVIEGPLMAG
MNVVGDLFGAGKMFLPQVVKSARVMKQAVAVLLPYMEAEKRANGGSGERQSAGKILMATV
KGDVHDIGKNIVGVVLACNNYEIIDLGVMVPATKILETAKAEKVDIIGLSGLITPSLDEM
VHVAAEMEREGFDIPLLIGGATTSRVHTAVKIHPRYERGQAVYVTDASRAVGVVGSLLSP
EMKLGYVETLKAEYRKVADAHARSEAEKQRLPITRARDNAFKADWSAYQPKTPSFLGTRV
FQDWDLADLARYIDWTPFFQTWELKGVYPKILDDEKQGPAARQLFADAQAMLEKIVTEKW
FTPKAVVGFWPAGVVGDDIRLFTDEARKAELATFFTLRQQLSKRDGRPNVALSDFVAPVD
SGKEDYLGGFVVTAGIGEIAIAERFERANDDYNSILVKALADRFAEAFAERMHEYVRREL
WGYAPDETFGPTDLIGEPYAGIRPAPGYPAQPDHTEKTTLFHLLDAEKEIGVTLTESYAM
WPGSSVSGLYIASPESYYFGVAKVERDQVEDYARRKGMEIAEVERWLGPVLNYIPTTARE
NAA
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggccaactcccccctggacgcccttttcgggcctgaacagccaccccgcgacggcaag
gagattcgtgccgcccttgaggccgccgcccgcgaacgcatcctcgttctcgatggcgcg
atgggcacggaaatccagacgctgaagctggtggaggaggatttccgcggcgaccgcttc
ggcgactgcgcctgccaccagcagggcaacaacgacctgctgaccctcacccagccgggc
gcgatcgaggacatccactatcgctatgcgcttgccggcgccgatatcctcgagaccaac
accttctcctccaccaccatcgcccaggccgactacggcatggaagacatggtgtatgag
ctgaaccgcgacggcgcgcgccttgcccgccgcgccggcctgcgtgcgcagcagaaggac
ggccgccgccgcttcgtcgccggcgcgctcggcccgaccaaccgcaccgcctccatctcg
ccggacgtcaacaatcccggctaccgcgccgtcaccttcgacaacctgcgcaccgcctat
gccgatcaggtgcgcggcctcatcgacggcggggccgacatcatcctgatcgagacgatc
ttcgacacgctgaacgccaaggccgcgatcttcgcgacgcgcgaagtgttcgaggaaaag
ggcatcgatctgcccgtcatgatctccggcacgatcaccgacctttccggccgcaccctt
tccggccagacgccggaggccttctggaactcggtgcgccatgccgatcccttctccatc
ggcctcaactgcgcgctcggcgccaatgccatgcgcgcccatctcgcagaaatttcctcc
gtcgcgcagaccttcgtctgcgcctatcccaatgccggcctgccgaacgccttcggcctt
tacgacgagacgccggaggaaatggccgcgcagatcgaaggcttcatgcgcgatggcctt
gtcaatgtcgtcggcggctgctgcggctcgacgccggatcatatccgcgccatcgccgag
gccgccgcgcgccacaagccgcgcaaaatccccgatattccccgccacatgcgcctttcc
ggcctcgagcccttcacgctgaccgaggccattcccttcgtgaatgtcggcgagcgcacc
aacgtcaccggctcggcgaaattccgcaagctgatcaccgcgggcgactatgcggccgcc
ctcgacgtcgcccgcgaccaggtagcgaacggcgcgcagatcatcgacatcaacatggat
gagggcctgatcgattccggccgggcgatgacggaatatctcaacctcgtcgccgccgag
ccggacatcgcccgcgtccccgtcatgatcgacagctccaaatgggaagtgatcgaggcg
ggcctgaaatgcgtgcagggcaagccgctggtcaactcgatctccctgaaggaaggcgag
gaagccttcctgcaccacgcgaagctcgtgcgcgcctatggcgcggccgtcgtcgtcatg
gccttcgacgagaccgggcaggccgataccaaggcgcgcaaggtggaaatctgcacccgc
gcctacaagctcctgaccgaagtcgccggcctcgccccggaagacatcgtcttcgacccg
aacatcttcgccgtcgccaccggcatcgaggagcacgacaattacggcgtcgacttcatc
gaggcgacgcgggacatcaccgcgacgctgccgcatgtgcatatctccggcggcgtctcc
aacctctccttctccttccggggcaacgagccggtgcgcgaggcgatgcacgccgtcttc
ctctaccatgccatccaggcgggcatggacatgggcatcgtcaatgccggccagcttgcc
gtctacgacacgatcgagccggaactgcgcgaggcctgcgaggatgtggtgctgaaccgc
gtgcccaaggccggcggcaccgccaccgagcgcatgctcgagatcgccgagcgcttcaag
ggcgcgggcggcaaggaggccaaggagcgcgacctcgcctggcgcgaatggccggtggaa
aagcggctggaacacgccctcgtcaacggcatcaccgaattcgtggaagaagacacggaa
gaggcccgccagaatgccgagcgaccgctgcatgtcatcgagggcccgctgatggccggc
atgaacgttgtcggcgaccttttcggcgcaggcaagatgttcctgccgcaggtggtgaaa
tccgcccgcgtgatgaagcaggccgtcgccgttctgctgccctacatggaggccgaaaag
cgcgccaatggcggcagcggcgaacggcagagcgcggggaaaatcctgatggccaccgtc
aagggcgacgtacacgatatcggcaagaacatcgtcggcgtcgtgctcgcctgcaacaat
tacgagatcatcgacctcggcgtcatggtgccggcaacgaagattcttgaaaccgcgaag
gcggagaaggtcgacatcatcggcctttccggcctcatcaccccctcgctggacgagatg
gtgcatgtcgccgccgaaatggagcgcgagggcttcgacattcccctcctcatcggcggg
gcgacgaccagccgtgtccacacggcggtgaagatccacccccgctacgagcgcggtcag
gccgtctatgtcaccgacgccagccgagccgtcggcgtcgtcggcagcctgctttcgccc
gagatgaagctcggctatgtcgagacgctgaaggcggaataccgcaaggtggccgacgcc
catgcacgcagcgaggcggaaaagcagcgcctgcccataaccagggcccgcgacaacgcc
ttcaaggccgactggtccgcctaccagcccaagacgccgtcctttctcggcacgcgcgtc
ttccaggactgggacctcgcggacctcgcccgctacatcgactggaccccgttcttccag
acctgggaactgaagggcgtctatccgaaaatcctcgacgacgagaaacagggccccgcc
gcccgccagctcttcgccgacgcacaggcgatgctggaaaagatcgtcaccgaaaaatgg
ttcacgccgaaggccgtcgtcggcttctggccggccggagtggtgggcgacgatatccgt
ctcttcaccgacgaggcgcgcaaggcggagcttgccaccttcttcacacttcgccagcag
ctttccaagcgcgacggccggcccaacgtggcgctctccgatttcgtcgcacccgtcgat
agcggcaaagaggattatctgggcggcttcgtcgtcaccgccggcatcggcgagatcgcc
attgccgagcgcttcgagcgggcgaacgacgattacaactcgatcctcgtcaaggcgctg
gccgaccgcttcgccgaggccttcgcggagcgcatgcatgaatatgtgcgccgggaactc
tggggctacgccccggacgagaccttcggcccgaccgacctgatcggcgagccctatgcc
ggcatccgccccgcgccgggctatcccgcccagccggaccatacggaaaagacgacgctc
ttccacctgctcgacgcagagaaggaaatcggcgtgacgctgacggagagctacgccatg
tggcccggctcctccgtctccggcctctacatcgcctcgcccgaaagctactatttcggc
gtcgccaaggtggagcgcgaccaggtggaggactatgcccgccgcaagggcatggaaatc
gccgaagtggaacgctggctcggcccggtgctcaactacatcccgacgaccgcgcgggaa
aacgcggcctga
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