Tachyglossus aculeatus (Australian echidna): 119941434
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Entry
119941434 CDS
T10703
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119941434 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tacu03400
]
119941434 (LIG4)
Enzymes [BR:
tacu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119941434 (LIG4)
DNA repair and recombination proteins [BR:
tacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119941434 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
DNA_ligase_IV
BRCT_2
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
119941434
NCBI-ProteinID:
XP_038617797
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All DBs
Position
20:complement(11668550..11676801)
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AA seq
908 aa
AA seq
DB search
MTSPQRTVASHVPFADLCSTLERIQRSKKRPEKIKHFTEFLDSWRKFHDALYKKAAGVAD
SFYPAMRLILPQLERERVAYGIKETMLAKLYIELLHLPREGKDALKLLNYRAPTGARGDA
GDFATVAYFVLQRRCRRQGCLSVQQVNDELDSVASNNSAKRKDLVKRSLLQLITQSSALE
QKWLIRMIIKDLKLGFSQQAVFSLFHRDAAELYNVTTDLEKVCRQLHEPSVGLSDISIAL
FSPFKPMLAAVADIQKIEKTMNQRSFYIETKLDGERMQMHKDGDVYRFFSRNGYDYTEQF
GASPREGSLTPFIHGAFRAGLRNCILDGEMMAYSSATRTFTQKGSRFDVKRMEEDSDLQT
CFCVFDVLMVDDRKLGHETLRGRHEILLGVFTPVEGRIEAVPKAQAVTKREVIDALNEAI
DKREEGIMVKDPSSIYKPDKRGEGWLKIKPEYVNGIMDELDLLIVGGYWGKGSRGGMMSH
FLCAVAETPPPGEKPSVFRTLCRVGSGYTMKELYDLGLKLAEHWKPYRKRAPPGCLSCGT
EKPEVYIEPCHSVIVQVKAAEIVGSDMYRTDCTLRFPRIERIREDKAWHECMTAEELQRL
RGRASGKLASRHFPAEDGEPQGKKRRAAPRAKRPLGVVEHRKAPDLADVRRVADVFEEVE
FCVMSGTDSHPKAELESRIAELGGCVVQNPGPDTYCVIAGTENVRVRNVISSNGHDVVRP
QWLLDCFEARRCLPWQPRFMVHVTPATQRHFAREYDRFGDSYFADTSPDQLKELFSGMKD
VPERGPREMAPVIADVEDRYAWDSRPLGLFRRHTVYVDRYPAAGRPGTGVPGTGLATTAL
ELRFHGAIVVARLREGVSHVIVGEDQSRVGELKAFRRTLRKKFKILRDLWVTHSIERGAL
QQESRYLI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacttctccacaacgaacggtggcatcccacgtgcccttcgccgatttgtgttccacg
ctggaaaggatccagagaagcaaaaaacgcccagagaagatcaagcactttacggagttt
ctagactcgtggaggaaattccacgacgccctctataagaaggcggcgggggtggcggat
tccttttatccagccatgagactgattctgcctcagctcgagcgagagcgggtggcctac
ggcattaaagaaaccatgctggccaaactttatatcgagctgctccacctccccagagag
ggaaaagacgcgctgaagctcttgaactaccgagcgcccaccggggctcggggggatgcc
ggcgacttcgccaccgtcgcctacttcgtgctgcagcggaggtgccgccgccaaggctgc
ctgtccgtccagcaggtgaacgacgagctggactccgtcgccagcaacaactccgccaag
aggaaggacctggtcaagaggagcctcctccaactgataacccagagttccgccctggag
cagaagtggttgatccggatgatcatcaaggacctgaagctgggcttcagccagcaggcc
gtgttctccctcttccaccgggacgccgccgagctgtacaacgtcaccaccgacctggaa
aaagtgtgcaggcagctgcacgagccctccgtggggctcagcgacatctccatcgccctg
ttctcccctttcaagcccatgctggcggccgtcgcggacatccagaagatcgagaagacc
atgaaccagaggagcttctacatcgagaccaagctagacggggaacgcatgcagatgcac
aaggacggggacgtctacaggttcttctcccgcaacgggtacgattacacggagcagttc
ggcgcctccccccgcgagggctccttaacgccgttcatccacggggcgttccgggccggc
ctccgcaactgcatcctggacggcgagatgatggcctacagctcggccacccgcactttc
acgcagaagggaagcaggttcgacgtcaagaggatggaagaggactccgacctgcagacg
tgcttctgcgtcttcgacgtcctcatggtcgacgacaggaagctgggccacgagaccctg
cgcgggcggcacgagatcctcctcggcgtcttcaccccggtggaggggaggatcgaagcg
gtgccgaaagcgcaggccgtcaccaagagggaagtgatcgacgcgctgaacgaagccatc
gacaagcgggaagaggggatcatggtgaaggatccctcgtccatttacaagccggacaaa
cgcggagaagggtggctgaagatcaagccggagtacgtgaacgggatcatggacgagctg
gaccttctgattgtcggcgggtactgggggaaaggctcccggggcgggatgatgtctcac
ttcctgtgtgcggtggcggaaacgcccccgccgggcgagaagccctccgtgtttcgcacc
ttgtgccgggtcggctccggctacaccatgaaggagctgtacgatctgggcttgaagctg
gccgaacactggaagccctaccggaagagagctcccccgggctgcctctcctgcggcacg
gagaagcccgaggtctacatcgagccctgccactcggtcatcgtccaggtgaaggccgcc
gagatcgtcggcagcgacatgtacaggacggactgcacgctgcgcttcccgcggatcgag
aggatccgggaggacaaggcgtggcacgagtgcatgaccgcggaagagctgcaacggctc
cgcggcagggcctccgggaagctggcctccaggcacttccccgcggaggacggggagccg
caggggaagaagcggagggccgcccccagggccaagaggccgctcggggtcgtcgagcac
cgcaaggccccggacctggccgacgtccgccgggtcgcggacgtcttcgaggaggtggag
ttctgcgtcatgagcgggacggacagccacccgaaggccgagctggagagccggatagcg
gagctgggcgggtgcgtggtgcagaacccggggccggacacctactgcgtcatcgccggc
accgagaacgtccgggtgaggaacgtcatctcctccaacgggcacgacgtggtcaggccc
cagtggctcctggactgcttcgaggccaggcggtgtctgccctggcagccgcgcttcatg
gtccacgtgactccggccacgcaacgccacttcgcccgcgagtacgaccgcttcggggac
agctacttcgcggacaccagcccggaccagctgaaggaactcttttcgggcatgaaagac
gtcccggagcgggggccccgggagatggcccccgtgatcgccgacgtggaagatcgctac
gcctgggacagccgccccctcggcctgtttcgccgccacacggtctacgtggaccgttac
cctgccgcgggccggcccggcaccggggtcccggggacggggctggccaccacggccttg
gagctgcggttccacggcgccatcgtcgtcgcccgtctgcgagaaggggtctcccacgtg
atcgtcggggaagaccagagtcgagtcggggagctgaaggccttccggagaactctccgg
aaaaaattcaaaatcctccgggacctgtgggtgacgcactccatagagaggggcgcgtta
cagcaggaatcccggtacttgatttaa
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