KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_23866
Entry
TRIADDRAFT_23866  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03018  RNA degradation
tad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRIADDRAFT_23866
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRIADDRAFT_23866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tad03019]
    TRIADDRAFT_23866
   03041 Spliceosome [BR:tad03041]
    TRIADDRAFT_23866
Messenger RNA biogenesis [BR:tad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TRIADDRAFT_23866
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     TRIADDRAFT_23866
Spliceosome [BR:tad03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    TRIADDRAFT_23866
 Complex C
  U2 snRNP components
    TRIADDRAFT_23866
SSDB
Motif
Pfam: LSM TIG_SUH
Other DBs
NCBI-GeneID: 6753134
NCBI-ProteinID: XP_002111417
JGI: 23866
UniProt: B3RUU9
LinkDB
AA seq 104 aa
MAEVATNEETSNTVEEPLDLVRLSLDERILVKMRNDRELRGRLHAYDQHLNMVLGDVEET
ITTVEIDDETFEELYKTSKRQIPMLYVRGDGVILVSPPLRVGGV
NT seq 315 nt   +upstreamnt  +downstreamnt
atggcggaagttgctaccaacgaagaaacctccaatactgttgaagaacctttagatttg
gtccgattgagtttggacgaacgaattttagtcaagatgagaaatgatagagaactccgg
ggaagacttcatgcctacgatcaacatttaaacatggtattaggcgatgtcgaagaaacg
atcacaactgtagaaattgacgatgaaacatttgaagaactatataagacttccaaaaga
caaattccaatgttatatgtacgtggtgatggtgtaattttggtctcgccaccgcttcgt
gttggaggtgtataa

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