Trichoplax adhaerens (placozoan): TRIADDRAFT_23866
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Entry
TRIADDRAFT_23866 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
tad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIADDRAFT_23866
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_23866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_23866
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_23866
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRIADDRAFT_23866
mRNA degradation factors
5'-3' decay
Lsm complex
TRIADDRAFT_23866
Spliceosome [BR:
tad03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
TRIADDRAFT_23866
Complex C
U2 snRNP components
TRIADDRAFT_23866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Motif
Other DBs
NCBI-GeneID:
6753134
NCBI-ProteinID:
XP_002111417
JGI:
23866
UniProt:
B3RUU9
LinkDB
All DBs
AA seq
104 aa
AA seq
DB search
MAEVATNEETSNTVEEPLDLVRLSLDERILVKMRNDRELRGRLHAYDQHLNMVLGDVEET
ITTVEIDDETFEELYKTSKRQIPMLYVRGDGVILVSPPLRVGGV
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagttgctaccaacgaagaaacctccaatactgttgaagaacctttagatttg
gtccgattgagtttggacgaacgaattttagtcaagatgagaaatgatagagaactccgg
ggaagacttcatgcctacgatcaacatttaaacatggtattaggcgatgtcgaagaaacg
atcacaactgtagaaattgacgatgaaacatttgaagaactatataagacttccaaaaga
caaattccaatgttatatgtacgtggtgatggtgtaattttggtctcgccaccgcttcgt
gttggaggtgtataa
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