Tichowtungia aerotolerans: GT409_05750
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Entry
GT409_05750 CDS
T07773
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
taer
Tichowtungia aerotolerans
Pathway
taer03030
DNA replication
taer03410
Base excision repair
taer03420
Nucleotide excision repair
taer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT409_05750
03410 Base excision repair
GT409_05750
03420 Nucleotide excision repair
GT409_05750
03430 Mismatch repair
GT409_05750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taer03032
]
GT409_05750
03400 DNA repair and recombination proteins [BR:
taer03400
]
GT409_05750
Enzymes [BR:
taer01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GT409_05750
DNA replication proteins [BR:
taer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GT409_05750
DNA repair and recombination proteins [BR:
taer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GT409_05750
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT409_05750
MMR (mismatch excision repair)
DNA ligase
GT409_05750
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GT409_05750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
FeoA
Motif
Other DBs
NCBI-ProteinID:
QHI68973
UniProt:
A0A6P1M7F3
LinkDB
All DBs
Position
1357210..1358442
Genome browser
AA seq
410 aa
AA seq
DB search
MLRHVLFFLTMLYLACAAAPPAAEQQAQNLNAILRQADEAYYNKHESLMSDAAYDALREQ
YDRLITDYPELAKAPSVGAPPSSQDRIAHHSPVLSLQKAYSGEFVSGFLETCGHQHLYCV
EPKLDGLTIVLRYHDGLLTRALTRGDGTAGTDVTAAVLASGAVPSALNNAPSRLEVRGEA
FLPLPAFEKLNKRRKTCGKPPLKSPRNTAAGTLQMNDYVEIARRGLQIRIFELLASDTEP
STHTEALRQINALGLPVIESRTVPAADVPASIDLLNEQRPSFPFLTDGIVIRIDDRSVFK
QLGRTAHHPRGALARKYRETPKETRLLNVEWTRGESGRLTPVAVFEPVEIDGATIQRASL
HNQNYLRAMNLMIGDQIRVIRAGGSVPEVVSCNLSARTGSESEIPDPPKK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtcatgtgctgttttttctgacaatgctctaccttgcctgtgcggcggccccg
ccggccgcagaacaacaggctcagaatctgaacgcaatcctgcgtcaggcagacgaggcg
tactataataaacacgagtcgctgatgagcgatgccgcgtacgacgctctccgcgaacaa
tatgaccggctgattaccgactatcccgagctggcaaaagcgcccagcgtcggcgccccg
ccgtcttcgcaagaccgcatcgcccaccattctcctgttctcagcctgcagaaagcctat
tcgggtgagtttgtttccggttttttggaaacatgcggccaccagcatctctattgtgtg
gagccgaaactggacggcctgacgattgttcttcgctatcacgacggattactcacgcgg
gccctcacccgcggcgacggaacagcaggaacagatgtcaccgccgcggttctcgcctcg
ggcgccgttccctctgcattaaacaatgctccttcccggctggaagtccgcggcgaagct
tttttgccgctgcccgcttttgaaaaactcaacaaacgccggaaaacctgtggcaaaccg
ccactgaaaagtccacgcaacaccgcggccggaacattgcaaatgaatgattatgtcgaa
attgcccggcgcggccttcaaatccggattttcgaactgcttgcttccgacacagaaccg
tcaacgcatacagaggccctcaggcagatcaacgctctcggcctccccgtcattgaaagc
cgaacggttcccgcggccgatgttcctgcctccatcgacctactgaatgagcaacgcccc
tcctttccttttttgacagacggaatcgtcatacgcatcgatgaccgttccgtgtttaag
cagctcggccgcactgcgcaccatccgcgcggcgctctggcccgaaaatacagagaaacg
ccaaaagaaacacgcctgctcaacgtggaatggacacgcggagaaagcggcagactgacg
ccggttgccgtttttgaaccggtcgaaatcgacggggcgaccattcagcgtgcttcgctt
cataaccagaattacctccgggccatgaacctgatgattggcgaccaaattcgcgtcatc
cgcgccggcggaagcgttccggaagtggtcagctgcaacctttctgcgcgaaccggcagc
gaatctgaaatccccgacccgccaaaaaaataa
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