Triticum aestivum (bread wheat): 123147618
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Entry
123147618 CDS
T07757
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123147618
03400 DNA repair and recombination proteins [BR:
taes03400
]
123147618
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123147618
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
123147618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
123147618
NCBI-ProteinID:
XP_044422816
LinkDB
All DBs
Position
7A:complement(470090396..470124911)
Genome browser
AA seq
1575 aa
AA seq
DB search
MASSASEKWAVVQYGHHGPATKVYQFQILLPNGTSTSLKLRDPGEEMPLPDFLHRIREEL
GDASSHCGQRRGIEWDGDVYLEDLLDRKIDKKVQFSDFVTKGTNILRLQDGEEFVRTYEN
MWDLTPPTELLQELPAEYSTESALADLVDNSLQALWSNGSKEIKLIRITVDGEKIVVFDT
GRGMDGSEDNSISKWGTMGSSNHRVFRKQGIGGKAPYLVPFFGMFGYGGTIASMHLGRTA
IVSSKTKESRKVFTLHLSREALLEKSSSKLSWKTAGGVRDPSEEELALSPHRSFTQVEIH
GLNRHLEPAKLRGFLKDIYFPYIQYDEDNGSASTRRPVQFEVNGVDLAEIQESEVTLTNL
HSSNGPDFDLHLKFACTSTNAASRQAHARIKCVYFPIVKGKESIDSILEKLSENALGVKE
NFDNFSRVSVRRLGRLLPDARWGSLPFMEPKQSKGQKAELLKRCCKRVKCFVETDAGFNP
TLSKTDLAQHDVFTKALRCFDGSCRNHSSVEEVSVDARKGERSLNRTQLEKQYHDWINNM
HAKYDVEMDGGDDEHTVIINPSNKERLGISKDVEVIRVHTSVSRKGKTWRRGDHLKIQPG
VVARMKNNFYSSKSNFYGTLEYVVVEGLRGDICGEARLICRSIECSGDQGCLLEVGQDSV
HLNIKESFSFPISVIDDNKCQTMDEDSWCQMLRKKSAKAPACIEVLRNSHGNDLAIDGDV
PFEKVITAGYNLPREIIAVIRPQNATTCSTSLLDKRYIVKDDDLEMAMEIYHLPGSKDHL
HAKLIYKKLKKPSSRNSINGLYIFQLSEETSMFTKSGVYSFIFSVRCRDSIVIKHETRIT
VRPNSNTRHWQLSCDADWSADNAVVDIRLGMSVRCLAARSHDLYGNGIPFLDIHKAVITI
LGGDDILAQVKDIKVDLSTDLLTLYIRDFLFKTNKLDRVRPNYEAMLKISLSDSELSHPC
KVKPGLPSTINMDMSLAWEKNLTPGEVIDDALLEVLDHCGNHVEEGTELIVNTVGFSFVD
KCGPVRKVNSKGFVDLRGMLKVVSGFGSEACLTIFHHKKKIFNRTFQIAIRNLKAVKVPE
SCPAGTFLENIIFEVSDCDGVIDESIHGLQHTLSIRSNQLKDVQGVQYAFEHGRCVLPRA
QVPNEPGTVSFVAYHTHFADLETIIQIHVYALDLVRVNSENDFEPICSYPTSSLSSQDLL
SPSQLASCQSVRYIEDALRKVSDEIESIDSNIRSEEEMIKFLDSQKKSVENRIASLKDEI
GHRVGAKEITRHKIEENVGTAAAVLCNLSNRKAYAPGRSFKDEVVGIVALLGTVANRELS
RMLSVYLGEDNMLAVVCKTQDAANYFEKYDTEGNVDIRFGIHQEAAKLGVPISRRFPIIC
LDEIRPYNGDVFWNIRQKKLNLPFPHSETPKGFRGFAVNLINLSAENLEIITSSGHGLRE
TLFYRLFGELQVYETRNDMRQAMPHLRNGAISLDGGIIKGDGMLLLGYSDPEIIFPVMPD
APDILEDPEDVFTKVKKMNAEKNVLETVENKIRRAEENRQKLVMKRNKKKRKFDEMAEVM
SQPSGSQLDQYHPVS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagcgcatccgagaagtgggctgtggtgcaatacggacaccacggtcctgca
accaaagtctaccagtttcagatcctgttgccaaatggcacaagcaccagccttaagctg
cgcgatcctggagaagagatgccgcttcctgatttcttacatcgtattcgggaagagttg
ggcgatgcctcctcacattgtggtcaaaggcggggaattgaatgggatggcgatgtttat
ctagaggacctgctggacagaaagatagacaagaaagtgcagttcagtgattttgtcact
aagggtactaacatattaagacttcaggatggtgaagaatttgtcaggacatatgagaat
atgtgggaccttacacctccgactgaactgcttcaagagcttccggcagaatatagcact
gagagtgctcttgcagaccttgttgacaactcattacaggctttgtggtcaaatggtagc
aaagaaataaagttaatcaggataactgttgatggagaaaagattgtggtttttgatact
ggtagggggatggacggttcagaagataattctatctctaaatggggtacaatgggttct
tctaaccacagagtatttcggaaacaaggtatcggcgggaaagcgccatacttagtgcct
ttctttggcatgtttggctatggtggaactattgcatcgatgcatcttggaagaactgcc
atagtttcttctaaaactaaggaatcaaggaaagtgtttaccttgcatctttcgagggag
gctctgttggagaagtcttcatctaaactcagctggaagactgctggaggagttagagat
ccatctgaagaagagttggcactgtcgccacatcgaagttttacacaggtggaaatccac
ggcttgaataggcacttggagccagctaaacttcgaggatttctgaaggacatatatttt
ccatatatacagtatgacgaggataatggatctgcgagtacaaggaggccagttcaattt
gaggtgaatggtgtagatttagcagaaatacaggaaagtgaagtgacacttactaatctg
cactcttctaatggtcctgatttcgatctgcatctaaaatttgcttgtacttcaacaaat
gcagctagtcgccaagcacatgctcggatcaagtgtgtatactttccaattgtcaaggga
aaagaatctatcgattctattttagaaaagttaagcgaaaatgccttgggggtgaaagaa
aactttgacaatttttcacgtgtgtcagtccgccgacttggccggttactccctgatgca
agatggggttctcttcctttcatggaacctaaacagagtaaaggacaaaaggctgaactc
ctgaagcgatgctgcaagagagtgaaatgctttgttgaaacggatgcgggttttaatcca
actctttctaagactgatttagcacaacacgatgtttttactaaggcacttcgctgcttt
gatggcagttgtcgtaatcacagctcagttgaggaggttagtgttgatgctcgtaaaggt
gaaagatcactaaatcgtacgcaattggagaagcagtatcatgactggattaataatatg
catgcaaagtatgatgtggaaatggacggaggggacgacgagcatactgttattatcaac
ccaagcaacaaggagcgacttggaatatctaaagatgtcgaagttattagagttcacacc
tcggttagcagaaaaggaaaaacatggagaagaggagatcatctgaaaatccaaccagga
gtagttgcacgaatgaaaaacaatttctactcatcgaaaagcaatttctatggaacactg
gaatatgttgttgttgaaggacttcgaggagatatctgtggtgaagctcgacttatatgc
aggtctattgagtgctctggtgatcaaggttgcttactcgaggtaggtcaagatagtgtg
caccttaatatcaaggaatctttctccttccctatcagcgtgatagatgataacaagtgt
caaaccatggacgaggattcgtggtgtcaaatgcttagaaagaaaagtgcaaaggctcca
gcgtgtattgaggtcttacggaattcacatggcaatgatcttgctatagatggggatgta
ccgtttgaaaaagttataacggctggttataaccttccacgtgaaataatagctgtaatc
cggccacaaaatgctactacctgctccaccagcctccttgacaagagatatattgtgaag
gatgatgatctagagatggcaatggagatttatcatctgcctggaagcaaagatcatctt
catgcaaagcttatttataaaaagctcaagaaaccctcatcgcgcaatagcataaatgga
ctgtatatctttcagttgagcgaagagacaagcatgtttactaaatctggtgtttacagt
tttattttctcagttaggtgcagagattcaattgtcattaagcatgaaacgaggataaca
gttcgtccaaactccaatactagacattggcagttatcctgcgatgctgattggtctgct
gacaatgctgtagtagatataaggcttggaatgtcagttagatgtcttgcagctagaagc
catgatttgtatgggaacggaattcctttccttgatatacataaggccgtcataactata
cttggtggtgatgatattctggctcaggttaaggacatcaaagtggatctctcaacagat
ttattgactctgtatatcagggattttctgttcaaaaccaacaaattggacagagtaagg
ccgaattatgaagcgatgttaaagatttctttatctgatagtgaactctctcatccatgt
aaagttaagccaggtcttccgtcaacaattaatatggatatgtcccttgcttgggagaag
aatttaactcctggagaagttattgatgatgcccttctagaggtgctcgatcattgtggc
aatcatgttgaagaagggacggaacttattgtcaatactgttggattctcctttgtagat
aaatgcggacctgttcgaaaggtaaacagcaaaggatttgttgacctacgtggaatgctt
aaagttgttagcggatttggttcagaagcttgtttgacgatttttcatcacaagaaaaag
attttcaatagaacatttcaaattgctatcaggaatttgaaagctgttaaggttccggaa
agttgtcctgctgggaccttcttggagaacataatatttgaagtttctgactgtgatgga
gtgattgacgagtcaatacatggactccaacatacacttagcatcaggtcgaatcaatta
aaagatgtgcaaggagtacaatatgcatttgaacatggaagatgtgttcttcctcgtgca
caggttcctaatgaaccaggaacagtcagttttgtggcatatcatacacattttgctgac
ctggaaacaataattcagattcatgtttatgctcttgatttagtgcgagtaaactcggag
aacgactttgaacctatatgcagctacccaacttcatctctatcaagtcaagatctttta
tctccaagtcaacttgcttcttgtcaatctgttagatacattgaggatgctctgaggaaa
gtttctgatgagattgaatcaattgattccaatatacgctctgaagaagaaatgattaaa
tttcttgattctcaaaagaaatctgtggagaatcgtattgccagtctgaaagatgagatt
ggccacagagttggcgcaaaagagataactcgtcataaaattgaagagaatgttggtact
gctgctgctgttctatgtaatctctccaaccgtaaagcatatgcaccagggcgatctttc
aaggatgaagttgttggtattgttgctcttctcggaactgttgctaacagagagctcagt
aggatgctttctgtgtatcttggtgaagacaacatgcttgcagtggtttgcaagactcag
gacgctgctaattactttgaaaaatatgacactgaaggaaatgtggatattcgctttggt
attcatcaggaagcagctaaactaggagtcccaataagcaggagatttcctatcatatgc
ctggatgaaataaggccatataatggagacgtcttttggaacataaggcaaaaaaagcta
aatctgccttttccacattcggagacgcccaagggatttcgtgggtttgcggtcaacttg
atcaatctttctgcagagaacttggagataatcacaagtagtggacatggtctccgtgaa
accttattttataggctctttggagagcttcaagtttatgaaacacggaatgacatgcgg
caagcaatgcctcatttgaggaatggggctatatctttggatggtgggattataaagggt
gatggtatgctgctgcttggttacagtgacccggagatcatatttcccgtcatgcctgat
gctcctgacattctggaagaccctgaggatgtgttcaccaaagtaaaaaagatgaacgca
gagaagaatgttctggaaacggtggagaacaagataagaagagctgaagagaatcggcag
aaattggtcatgaagcgcaacaagaagaaacgcaaattcgacgagatggcggaggtaatg
agccagcccagtggcagccagcttgatcagtatcacccagtgtcatag
DBGET
integrated database retrieval system
