Triticum aestivum (bread wheat): 123148229
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Entry
123148229 CDS
T07757
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123148229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123148229
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123148229
Complex C
U5 SnRNP specific factors
123148229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
EF-G_D2
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
123148229
NCBI-ProteinID:
XP_044423543
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All DBs
Position
7A:complement(559582065..559587540)
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AA seq
994 aa
AA seq
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MDDSLYDEFGNYIGPELADSDADDSDAAASPSPSQSRSPSPARSPSGSPNSRRPAALMDV
DDDDYADAAQNAVVLAEDKKYYPTAEEVYGPGVEALVMDEDEQALEKPIVAPPRVVKFEV
GTRAGATSTYASTDFILGLASNPLLVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEG
ERHIRFTDTRVDEQERRVSIKAVPMSLVLESGNGKSYLCNIMDTPGHVNFSDEMTAALRL
ADGAVLVVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPNDAYFKLRHT
LDTINDLISSCSTTVGGTQLVDPAAGNVCFASGSAGWSFTLQSFAHLYLKIHGIQFDHEK
FASRLWGDLYYDHNSRTFKKKPPAAGANRSFIEFILEPLYKIYSQVVGEQQRILEVTLAD
LGVTLSNAAYKLNVRPLLRLACRSIFGTATGFTDMLVKNIPNVKDGAARKIEHIYTGQQD
SSIVDAMKKCDSHGPLMVNVTKLYPKPDCSVFDAFGRVYSGTIQTGQTVRVLGEGYSPDD
EEDMTVKEVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICPMNMDEDVYIFR
PLRFNTLPVVKIAAEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLD
SIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKITMLAEPLEKGLAE
DIENGLVSLDSRQKEVTDFFRQRYQWDVLAARSIWAFGPDKQGPNILLDDSLSVEVDKNL
LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYS
AFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPVYVVKAFLPVI
ESFGFETDLRYHTQGQAFCVSVFDHWAIVPGDPLDKGIVLRPLEPAPIQHLAREFMVKTR
RRKGMSEDVSINKFFDEAMMNELAQQTADIHLMM
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcctctacgacgagttcggcaactacatcggcccggagctcgccgactcc
gacgccgatgactcggacgccgccgcctccccgtccccctcgcagtcccgctccccctcc
ccggcgcgctccccgtccggctcccccaactcccgccgccccgccgccctcatggacgtc
gacgacgacgactacgccgacgccgcccagaacgccgtcgtcctcgccgaggacaagaag
tactaccccacggccgaggaggtctacggcccgggcgtcgaggcgctcgtcatggacgag
gacgagcaggcgctcgagaagcccatcgtcgcgccgccccgcgtcgtcaagttcgaggtc
ggcacccgcgccggtgcgacctccacctacgcctccaccgatttcatcctcggcctcgcc
tccaacccgctgctggtccgcaatgtggcgctcgtgggccacctgcagcacgggaagacg
gtgttcatggacatgctcgtggagcagacccacgaggtggacacgttcgactccgagggc
gagcgccacatccgtttcacagacacccgggtcgacgagcaggagcgcagggtctccatc
aaggctgtgccgatgtcgctcgtgctagagtcagggaatggcaagtcctatctctgcaac
atcatggatacgcctgggcatgtcaatttttccgacgagatgactgctgcgctcaggcta
gcggatggggctgtgcttgttgtcgatgctgctgagggcgtcatggtaaacactgagagg
gcgattcgtcatgcgatccaagaaagacttcccatcgttgttgtgattaacaaggttgac
agactgataacagagctaaagctgcccccaaatgatgcgtattttaagctacgacataca
ctggacacaatcaatgatctaatctcatcttgttctaccacagtaggtggcactcaactg
gtagacccagctgctggaaatgtttgctttgcgagtggttctgctggctggtcttttacc
ttgcaatcttttgcgcatctttatttgaagattcatgggattcagtttgaccatgagaaa
tttgcatctcgtctgtggggagatttgtattatgaccataactctagaaccttcaaaaag
aagccgccagcagcaggagctaataggtcattcattgagttcatccttgagcctctgtat
aaaatctatagtcaggttgttggagagcaacagagaattcttgaagtaactctcgctgac
ttgggtgtgacactgagcaatgcagcttataagcttaatgttaggcctttgctgagactt
gcttgccgctcaatttttggcactgctactggttttaccgacatgttagtgaaaaacatc
cccaatgtgaaggatggcgctgcaaggaaaatagaacacatatacactggtcaacaagac
tcctccattgtggatgcaatgaagaaatgtgattcccatggtcctcttatggtcaatgtt
acaaaactgtatcctaagcctgactgtagtgtctttgatgcctttggacgagtttatagt
ggcacaatacagactggtcagacagttcgggtgcttggagaaggctattcccctgatgat
gaagaggatatgactgtcaaagaggtcaccaagttgtgggtctatcaggcacggtaccgt
gttccaataagtaaggcacctgctggttcttgggttcttattgaaggcgtggatgcatca
atcatgaaaactgcaaccatatgtcctatgaacatggatgaagatgtgtacatatttagg
cctctacgcttcaataccttacctgttgtaaagatagcagctgagcctcttaacccgagt
gagctgcctaaaatggtggaaggtctgcgtaaaattagcaagagctaccctcttgctatt
actaaggtagaagagtcaggcgaacacactatacttgggactggtgagctatatctagat
tcaataatgaaggacctcagagagctttactctgaggtagaagtgaaggttgcagatcca
gttgtgacattttgtgaaacagttgttgatacttcctctatgaaatgttttgctgaaaca
cccaacaagaggaacaaaattaccatgttagctgaaccactagagaagggcttggcagaa
gatatagagaatggccttgtcagccttgactcaaggcagaaagaagtcactgacttcttt
cgccaacgctaccagtgggatgtgcttgcagcaaggtcaatatgggcttttggacctgac
aagcagggtcctaacattctactggatgactctctttcggttgaggtggataagaacttg
ctgaatgcagtcaaagattcaattgttcaagggtttcagtggggtgctagagaaggcccc
ttgtgtgatgaaccaattaggaatgtgaagttcaagatcctaaatgcaaatatcgcacca
gaaccattgcaccgtggtggcggccaaataatccccacagctcgccgggttgtctactca
gcatttctgatggctaatcctcgacttatggagcctgtttattacattgagatccaaact
ccaattgactgtgtatctgctatatatacggtcctgtcgcggcgacgtggacatgtgaca
gccgatgtacccaagcctggcactccagtatatgttgtcaaggcatttttacctgtcata
gagtcttttgggtttgagacagatctcagataccatacacagggacaagcattttgtgtg
tcagtgtttgaccactgggctattgttcctggcgatcctcttgacaagggcattgttctc
cggcctttggaaccagcacctatccaacaccttgcccgtgagttcatggtaaagaccagg
cggaggaagggcatgagcgaggatgttagcatcaacaagttctttgacgaggccatgatg
aacgagctggcgcaacagactgcagatatccacctgatgatgtag
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integrated database retrieval system
