KEGG   Triticum aestivum (bread wheat): 123180590
Entry
123180590         CDS       T07757                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1-like
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123180590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:taes03021]
    123180590
Enzymes [BR:taes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     123180590
Transcription machinery [BR:taes03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     123180590
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Zn_ribbon_2 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 123180590
NCBI-ProteinID: XP_044448600
LinkDB
Position
1D:complement(104445588..104457638)
AA seq 1425 aa
MEEPNAEMGMPTGELKGITFYLMTNTEMEKSSSASIVEPSDVSSAKLGLPNGAPQCETCG
AQSVRECDGHSGVIKLPATVFNPHLFEEVVQLLNQICPGCHTPKQNRDSKRSDGATSQAT
CKYCSKDGTKQYPDVIFKTLTSPRITLSKAKLLRDHNVMDKISLTAEVADRVTDSAEVLP
LDYWDFVPHHHPPQSNMTKILLSPYQVSHILEQLDPKLFSRFASRPELIFLSCLPVTPNF
HRVAELPYGFSDGPRLAYDDLTKAYKRTVDVGRKLDDLRQHPQFSVLASSLVTSRVVECL
KLSKLHSKKTDKESSTDTHGMKWLKDAILSKRSDNAFRGTMVGDPKIRLHEIGIPVDLAS
NLVVSEHVNSYNFDNINLKCNCYLLANEKLVIKRSGKTIIVRKPNQLVIGDTVHRLLQDG
DLILINRPPSIHQHSLIGLSAKLLPVQSVLSINPLCCAPLAGDFDGDCLHGYVPQSIQSR
VELGELVSLSHQLLNAQDGRSLVSLTHDSLAAAYLLTSSEVLLKKTEVQQFQMLLCHPLS
PTPGPAIMKSIHSHGPLWTGKQLFSMLLPSDMSFSIEPKVHIVDGEVLACPSESFWLQNS
ISGLFSVMFKQYGDKALELLSSAQDVLCEFLTMRGLSVSLSDIYLFPDHDSRRKLADGVN
LALDDAEEAFCIKQILLSPDSIPILKCYDDCADLSQSYEQSNFIQSNLPIIKSSIMAFKS
VFSDLQKMVQQHTAKNNSMMMMTNAGSKGSMLKFVQQTACVGLQLPASRFPFRIPSELSC
ASWNRHKSEGTGECLGGQNLYAVIRNSFAGGLNPLECLLHSISGRANFFSENADVPGTLT
RKLMYHLRDLYVAYDGTVRSSYGQQIMQFTYDTAEDMCSDRDVEGELGAPVGSWAACSIS
EAAYGALDHPVNSLEESPLMNLQDVLKCQKGGTSMDHVGLLFLSKNLKKYRYGLEYASLE
VKDHLEPVNFSDLVDTVMILYGGCGIESTKGSPWITHFHLSQEMMTKKRLGLTLVVEELT
EQYNAKRDKLNFPKVYISKGKCSADHECGNRQTCCITVVTQDDSNSMSQLDTIKKRVIPN
LLALLVKGFLEFKKVEIQCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIMELIDWER
SRPGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSVSGQFHGLSS
QGLKQQRTRLSISSPFSEACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGKEPSTGTSGP
FKIIYSGKAHAPIPNENIYDFLNSPEVRQAPGEAFLNGSTISVEQDFLVATVGIWDNIID
MRTCLQNMLREYQLNECVVELDKSRVIEALRFHPRGREKIGAGIKDIKIGHHPSHPGTRC
FIMVRDDGTTEDFSYKKCVQAAADSISPELGRYVERILRNRAVSS
NT seq 4278 nt   +upstreamnt  +downstreamnt
atggaggagccaaatgctgaaatgggaatgccaaccggggagctgaaaggcatcacattc
tatctcatgaccaatacagagatggaaaagtcaagcagcgcgagcattgtagaaccatct
gatgtcagtagtgccaagttgggactaccaaatggggcaccacagtgtgagacttgcgga
gcgcagagtgtgcgtgaatgtgatggtcattctggcgtgattaagctgccggcaactgtg
ttcaacccgcatctattcgaggaagttgttcagttactgaatcagatatgtcctggctgc
cacactccaaagcagaacagagattcaaagaggtcggatggggcaacaagtcaagcaact
tgcaagtattgctcaaaggatggcactaaacaataccccgatgtaatctttaagacactg
acaagcccaagaataacactgtccaaggctaaacttctacgggaccataacgttatggac
aaaatttcgcttactgcagaagttgctgacagagtgactgattcagctgaagttcttccc
ctggactattgggatttcgtacctcatcaccacccccctcaatcaaatatgaccaagata
ttattgtctccataccaagtctctcacatattggaacaacttgatcctaagctatttagc
cggtttgcttcaaggccggagctaattttcctgtcgtgtttgccggtgactcctaacttc
catcgcgtggcggagttgccctatgggttttcagatggccctcgcctagcttatgatgac
ctgacaaaagcttacaagaggacggttgatgtcggtaggaaacttgatgacttgcgtcag
catccacagttcagtgttcttgcaagttcacttgtcacaagccgagttgtggagtgcctc
aaattgtcaaagttacactctaaaaagacagataaggaatcatcaacagacacacatgga
atgaaatggttgaaggatgccattctcagcaaacggtctgataatgcttttcggggtact
atggtcggtgatccgaagattagattgcatgaaattggcatccctgtggatttagcttcg
aacttggttgtttctgagcatgttaactcctacaactttgacaacataaatttgaagtgc
aactgttaccttcttgccaatgaaaaactagtcattaagcgtagtggaaagacaattatt
gttcggaagccaaatcagctggtaattggtgacactgtgcacaggctgttgcaggatggt
gatcttattcttatcaataggccaccgtcaatacatcaacactcccttattggactctct
gcaaaattactcccagttcagtcggtactttcaatcaacccactctgttgtgcaccactc
gcgggagattttgatggggactgtttgcatggatatgtcccacagtccatacagtcaaga
gttgagcttggggagctagttagtttgagccaccaactattgaacgcgcaagatgggcga
agtttggtgtcattaacacatgactctctagctgcagcatatctgttaacaagctcagag
gttttactaaagaaaactgaagttcagcaatttcaaatgttattatgccatccactctcg
ccgacaccagggccagcaataatgaaatctatacactctcatggtccactgtggaccggt
aagcagttgttcagcatgctgcttccatctgatatgagtttcagcattgagcctaaggta
cacatcgtagacggtgaagttcttgcctgcccatctgaatctttttggctgcagaatagc
atatctggccttttttccgtcatgttcaaacaatatggcgacaaggctcttgagttactc
tcttctgctcaggatgtactatgtgagtttttaaccatgagaggtttaagtgtcagtctt
tcggatatctatctgttcccggaccatgactcgaggagaaaactagctgatggagttaat
ctggcattggatgatgctgaagaggctttttgtattaaacagatattgctaagtccagat
tccataccgattctgaaatgttatgacgactgtgctgatttatcacaatcttatgaacag
tccaatttcattcagagcaatctgccaattataaaatcttcaatcatggcgtttaagagt
gtattcagtgatcttcagaagatggttcaacagcacacagccaaaaataattcaatgatg
atgatgactaatgcaggaagtaagggtagcatgttgaagtttgtgcaacaaactgcatgc
gtcggtcttcaacttccagcaagcagattcccctttagaattccgtcggaactctcatgt
gccagctggaatagacataaatctgagggcacgggtgaatgcttgggaggccaaaacttg
tatgctgtgatcaggaattcctttgctggtggtttaaatccattggagtgtcttcttcat
tcgatatctggcagagcaaacttcttcagtgagaatgcagatgttcctgggactttaaca
agaaaactaatgtatcacctgagggatttatatgttgcttatgatgggactgttagaagt
tcttacgggcagcagataatgcagttcacttatgatactgctgaagacatgtgcagtgat
cgcgatgtggaaggtgaactcggtgcccctgttggttcgtgggctgcttgttccatttca
gaagctgcatatggagctttggatcacccagtgaacagcttggaggaatctcctctcatg
aatttgcaggatgtattgaagtgccagaagggtggtacttctatggatcatgttggtttg
cttttcctgtcaaagaatctaaaaaaatatagatatggtttggagtatgcatcgctagaa
gttaaggatcatctcgagccagtgaacttctctgatttggttgacaccgtcatgatccta
tatgggggatgtggtatagagtcaacaaaaggaagcccatggattactcattttcatcta
agccaggaaatgatgacgaaaaaaagattgggactaacacttgttgtggaagagcttaca
gaacaatacaatgccaaaagagacaagttaaacttccctaaagtttatatttcaaagggc
aaatgttctgctgaccatgagtgcggtaacaggcagacttgttgcatcactgtggtaaca
caggatgattcaaactctatgtctcaattggacactatcaagaaaagggtgattccaaac
ctcctggccttactagtgaaaggatttttggaatttaagaaagttgagatccagtgtcaa
gaggacagtgaacttgttgtgaaagttgttatgtctgaggagcattgcaagagtgtgaag
ttttgggctactctacaaaagtcttgcatagcaattatggagttgattgactgggagcgg
agccggccagggagcgtatatgatattttctgctcatatggcatagactcagcatggaaa
tactttgttgaatctttaagatcaaaaactgatgatattggaaggaatattcgccgcgaa
cacttgctggtcgtggcaaattgcctgtctgtaagtgggcagttccatggactaagcagt
caaggtttgaagcaacaacggactcgattatcaatctcatctccattttctgaagcttgt
ttttctaggcctgcacatacttttataaatgctgcaaagcagtcttcagtggacaatctc
tgtggtactgtagatgcaatggcctggggcaaggagccttctactgggacatcaggtcct
ttcaagattatttattctgggaaggcgcatgcacccataccaaatgagaacatctatgac
ttcctaaatagccctgaagttcggcaagcgccgggtgaagctttcttgaacggtagcacc
atatctgtggagcaagattttcttgttgctacagttggtatatgggacaacattattgat
atgcgcacttgcttgcagaacatgctacgagagtaccaattaaatgaatgtgttgtggag
ctagataaatcacgtgtaatcgaggccctgagatttcatcccagagggcgtgaaaagatt
ggtgctggaataaaagatataaagattggacatcatcctagtcacccaggaacaaggtgc
ttcattatggtacgggacgacggtaccactgaggacttttcttacaagaaatgtgtccag
gctgccgcggattctatctcgcctgagctcggacgttatgtagagaggatactacggaac
agagcagtttcgtcataa

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