Thermococcus aggregans: NF865_03985
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Entry
NF865_03985 CDS
T10933
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
tagg Thermococcus aggregans
Brite
Enzymes [BR:
tagg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NF865_03985 (rlmD)
Ribosome biogenesis [BR:
tagg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NF865_03985 (rlmD)
BRITE hierarchy
Other DBs
NCBI-ProteinID:
USS41595
UniProt:
A0A9E7MZC3
LinkDB
All DBs
Position
complement(698492..699736)
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AA seq
414 aa
AA seq
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MKGKGYITKVSPDGYGVLKLEKEIYVPYTVTGDFVEVRQTFRRFGRLIARDFEILEESPL
RQNPRCPHFSKCGGCSWQHIKYKEQLTLKKKIFEEITGIEAPIKGSPKIWGFRNISNFIV
STNGIGFKQRDSQSVVGIKHCPVFSTRTSEFIKALKRFMDEEGLYPWDPKRKIGDVHYLS
IREGKFTGEVMVNVISHREEVPQSFLDYFEFADSLYWSFNEDPRDDPRGVPKLVGGSPFI
RERIEGITYLIHPNSFFQTNSYALPILLREVLNFVEGDRILDLYSGVGTFGVFLAKEGFK
VEGVDMNSFAIDMANKNAEINGVSASFLVKDAESFPVGEYDTVIVDPPRRGLKEAVKSLK
KERPENIVYVSCNPQAFSRDYSHLKDIYRVEDAILVDMFPHTHHVEAVIKLKRW
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaaaggctacataacaaaggtaagtccagacggctacggcgtgttaaaactt
gaaaaagagatttacgttccttacactgttactggggattttgtagaggttagacaaaca
tttaggaggtttggacgtttaattgcaagggactttgaaattcttgaggaatcccccttg
aggcaaaatcccagatgtccgcatttctcaaaatgcgggggttgttcttggcagcacata
aaatacaaagagcagttaactcttaagaagaaaattttcgaagagataaccgggattgaa
gctccaataaaaggttctcccaaaatttggggttttagaaacatcagcaattttattgtc
tcaacgaacggtattggatttaagcaaagagattctcaaagcgttgttgggattaagcac
tgtcccgttttttccacccgcacttcggaattcataaaagctttaaagcgctttatggat
gaagaagggctttatccttgggatccgaaaaggaaaattggcgatgttcactacctttcc
atcagggaagggaagtttactggggaagttatggttaatgtgatttcacaccgggaagaa
gttccgcaaagctttttagattactttgagtttgcggattccctttattggagctttaac
gaagacccaagagacgaccccagaggcgtaccgaaacttgtaggtggctcgccgtttata
agggaaagaattgaagggattacctacttaatacatccaaacagctttttccagacaaat
tcttatgctctccctatccttttaagagaggttttaaattttgttgaaggggacagaatc
cttgacctttattccggtgtgggaacttttggagtgtttttagcaaaagaagggtttaag
gttgaaggagtggatatgaattcctttgccatagacatggctaacaaaaatgctgaaata
aatggtgtgagcgcttcttttcttgtaaaggacgctgaatccttccctgtgggagagtat
gatacagttattgttgacccaccgcgcagaggtttaaaagaagctgtaaaaagcctaaaa
aaagagaggccggaaaacatcgtttatgtctcatgcaaccctcaagcatttagcagggat
tattctcacctgaaggacatttatagagtggaggacgctattttagttgatatgtttccg
catactcaccatgtagaggcagttataaagctcaagcggtggtaa
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