Thermanaerovibrio acidaminovorans: Taci_1117
Help
Entry
Taci_1117 CDS
T01129
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
tai
Thermanaerovibrio acidaminovorans
Pathway
tai03030
DNA replication
tai03410
Base excision repair
tai03420
Nucleotide excision repair
tai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Taci_1117
03410 Base excision repair
Taci_1117
03420 Nucleotide excision repair
Taci_1117
03430 Mismatch repair
Taci_1117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tai03032
]
Taci_1117
03400 DNA repair and recombination proteins [BR:
tai03400
]
Taci_1117
Enzymes [BR:
tai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Taci_1117
DNA replication proteins [BR:
tai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Taci_1117
DNA repair and recombination proteins [BR:
tai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Taci_1117
NER (nucleotide excision repair)
GGR (global genome repair) factors
Taci_1117
MMR (mismatch excision repair)
DNA ligase
Taci_1117
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Taci_1117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
5_3_exonuc
zf-NADH-PPase
BRCT_2
UPF0758_N
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ACZ19349
UniProt:
D1B5Q8
LinkDB
All DBs
Position
complement(1172629..1174650)
Genome browser
AA seq
673 aa
AA seq
DB search
MDRSAARSRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFPDLRLPDSP
TLRVSGSPSEAFKRLPHSEPMLSLDNAVSREEVSDFLRRLYDALGGSAPVVCEPKLDGLA
VSLLYRGGVLIRGLTRGDGSVGEDVTSNVMTIRDLPKRIDYMGELEVRGEVYMSRRDFAA
LNQRREEEGLPPFANPRNAAAGSLRQLDPRVTAQRNLSCFLYHVVNHREVGLKTQEELLL
WLKGRSFPVQEDFRLCRDPEEVLEYLDDWDRRRHSYPADTDGVVIKLDSLEGREVLGSTN
RSPRWAVAFKFPPEERPTRVLSIEVSVGRTGVVTPTAVLEPVRLSGTEVRRASLHNFDEL
ARKDVRVGDTVWVRKAGEIIPEVIRVDLGLRPEGTAPFVPPEGCPSCGSRLVRLPGEVAI
RCINPSCPAQMKERIIHFASRDGMDVRGLGEKVASQLVDRGMVKDLADLFFLTMEDWLSL
DRMGERSASNLVRALDVARDRPLRKLIYALGIPGVGERTAQDLADRFGRLEALMDASEEE
LASVEGVGPVVARSVRDFFRNDSTVRLVRRLRDAGVRMEERPTAGGPLEGMRFVFTGELG
SMRRKEAQDLVIRLGGKVSDSVSKGVTALVAGEGGGSKLSRARALGVPIWSEDRFLELVR
EHTDLQGGVGGEG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctccgccgcgcgcagcaggatggaggagctagcggagctcatacggcaccac
gacaggctctactaccaggagaactccccggagataaccgaccaggagtacgacgccctg
ttcagggagctggtggacctggagcggtccttcccggacctgaggctgccggactccccg
accctcagggtgtccggctccccatcggaggccttcaagcggctcccccactcggagccc
atgctgagcctggacaacgcggtgagccgtgaggaggtgtcggacttcctgcggaggctc
tacgatgccctggggggatccgccccggtggtctgcgagcccaagctggacggcctggcg
gtgagcctcctctaccggggtggcgtcctgatccgggggctcaccaggggggatggctcc
gtgggggaggacgtgacctccaacgtgatgaccataagggaccttcccaagcggatagac
tacatgggggagctggaggtccggggggaggtatacatgtcccggcgggacttcgcggcg
ctgaaccaacggagggaggaggagggactgccccccttcgccaatccccggaacgccgcg
gcggggtccttgaggcagctggaccctagggtgaccgcccagaggaaccttagctgcttc
ctctaccacgtggtgaaccaccgggaggtggggctcaagacccaggaggagctcctcctc
tggctaaaggggcggtcgttcccggtacaggaggacttccgtctctgtcgggacccggag
gaggtgctggagtacctggacgattgggatcggcggaggcattcgtacccggcggacacc
gatggggtggtgataaagctggactccctggaggggagggaggtgctgggcagcaccaac
cggtccccccggtgggcggtggcgttcaagtttcccccggaggagcgccccacccgggtg
ctctccatagaggtttcggtgggtaggaccggggtggtgacccccacggcggtgttggag
ccggttcgcctctcgggcaccgaggtgcggcgggccagccttcacaacttcgacgagctg
gcccggaaggacgtccgggtgggggacaccgtatgggttcgcaaggcgggggagataatc
cccgaggtgatccgggtggacctgggcttgaggcctgaggggacggcccccttcgtgccc
ccggaggggtgtccctcctgcggatcaaggctggtccgtctccccggggaggtggccata
aggtgcatcaacccctcttgccccgcccagatgaaggagcggatcatccacttcgcctcc
cgggacgggatggacgttcgaggtcttggggagaaggtggcctcccagctggtggatagg
gggatggtcaaggacctggcggacctcttcttcctcaccatggaggactggctctccctg
gataggatgggggagcgctccgcctccaacctggtgagggccctggatgttgcccgggac
aggcccttgaggaagctgatctacgcccttgggatccccggcgttggggagaggaccgcc
caggacctggcggaccggttcggccgactggaggcgctcatggatgcctcggaggaggag
ctggcgtcggtggagggggtggggccggtggtggcccggtccgtaagggacttcttccgc
aacgactccaccgtgcgtctggttcgaaggcttagggatgcgggggtccggatggaggag
cggccaaccgcgggggggccgttggagggtatgaggttcgtcttcactggggagctggga
tccatgaggcgaaaggaggcccaggacctggtgatccggttggggggcaaggtgtccgat
tcggtctccaagggggtcaccgccctggtggccggggaggggggaggaagcaagctctcc
cgggcccgggcgctgggggtgccgatctggagcgaggaccggttcctggagctggttagg
gagcacaccgatcttcaagggggtgtaggcggtgagggttga
DBGET
integrated database retrieval system
