Tyto alba (Barn owl): 104355857
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Entry
104355857 CDS
T07816
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tala
Tyto alba (Barn owl)
Pathway
tala00514
Other types of O-glycan biosynthesis
tala04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104355857 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104355857 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tala01003
]
104355857 (RFNG)
Enzymes [BR:
tala01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104355857 (RFNG)
Glycosyltransferases [BR:
tala01003
]
Glycan extension
O-Glycan
104355857 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
104355857
NCBI-ProteinID:
XP_032857740
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MSGSCLGLRKACFLLSVSAAALLLLLLPRGQPPAAPRRRPPPAAAPSGPPPPRAGPGGSG
APGTRAGPRGEPGGGPGAGRGGGLAGSPQPARKGRFGPAGGSARESLELKDIFIAVKTTR
KYHKSRLDLLLQTWISQAWGQTFIFTDWEDQELRLKAGDHMINTNCSAVHTRQALCCKMS
VEYDKFLESGQKWFCHVDDDNYVNPRTLLSLLSAFSHSQDVYVGRPSLDHPIEAADHVQS
DGSKTTVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLL
EVKLLHSPLFHSHLENLQRLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRFKS
VHCLLYPDTIWCPAKKMS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctcctgcctggggcttcgcaaggcctgcttcctgctgtccgtcagcgctgcc
gccctcctcctcctgctgctgccgcgggggcagccccccgccgcgccccgccgccgcccg
ccgcccgccgctgcacccagcgggcccccgccgccgcgggcgggacccggggggagcggc
gcgcccggcacacgggcgggaccccgcggggagccgggcggcgggccgggggccgggcgg
ggcggcggcctcgctggcagcccgcagcctgcgcggaagggccggtttgggcctgccggg
ggctcggctagggagagcctggagctgaaggacatcttcatcgcggtgaagaccacgagg
aagtaccacaagagtcggctggacctgctcctccaaacctggatctcgcaggcgtgggga
cagacgtttatattcacggactgggaggatcaggagctacgcctgaaagcaggggatcat
atgatcaataccaactgttctgctgtccatacccggcaagctctctgctgcaagatgtct
gtggaatatgataaattcctggagtctgggcaaaaatggttttgccatgtggatgatgac
aactatgtgaaccctcggactctcctgagtctcctttctgccttctcgcacagccaggat
gtctatgtgggacgaccaagtctggaccatcccattgaagcagctgaccatgtccaaagt
gatggttcaaagacaaccgtgaaattctggtttgccacaggtggagcagggttttgtatc
agcagaggtcttgccctgaagatgagtccctgggccagcctgggtaatttcatcagtact
gcagaaagagtgcgtcttcctgacgactgcactattggctacatcattgaggggctgctg
gaggtaaagctactgcacagcccattgtttcattcccatctggaaaatctgcagagacta
caaggcgagtctgtactgcagcaggtaaccctaagttacggagaccctgagaacaaacac
aatgttgtgagtgtgggaggagtgtttggccttcagcaagatccaacccgatttaaatct
gtccattgtctgctttatcctgacactatttggtgccctgctaagaagatgtcataa
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