Tyto alba (Barn owl): 104358725
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Entry
104358725 CDS
T07816
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03440
Homologous recombination
tala03460
Fanconi anemia pathway
tala04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104358725 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
104358725 (BRCA1)
03460 Fanconi anemia pathway
104358725 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tala01009
]
104358725 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tala04121
]
104358725 (BRCA1)
03036 Chromosome and associated proteins [BR:
tala03036
]
104358725 (BRCA1)
03400 DNA repair and recombination proteins [BR:
tala03400
]
104358725 (BRCA1)
Enzymes [BR:
tala01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104358725 (BRCA1)
Protein phosphatases and associated proteins [BR:
tala01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104358725 (BRCA1)
Ubiquitin system [BR:
tala04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104358725 (BRCA1)
Multi subunit type E3
BRCC complex
104358725 (BRCA1)
Chromosome and associated proteins [BR:
tala03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104358725 (BRCA1)
DNA repair and recombination proteins [BR:
tala03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104358725 (BRCA1)
BRCA1-A complex
104358725 (BRCA1)
BRCA1-B complex
104358725 (BRCA1)
BRCA1-C complex
104358725 (BRCA1)
BRCA complex
104358725 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
104358725 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
BRCT_2
zf-RING_2
BRCT_3
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-Nse
zf-RING_6
zf-MIZ
zf-ANAPC11
APMV_polyA_pol_cat_2nd
Motif
Other DBs
NCBI-GeneID:
104358725
NCBI-ProteinID:
XP_032841864
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MDLSVIAIGDVQNVLSAMQKNLECPICLDMVEEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKTDVTKRSLKENPRFKQLIDSLLETMHAFELDTGVKFLNSHRFPKTSTETTSAEF
LCKESSVIQSKGFRNRKKSAKENGQENFTLHEANVDTQLTDTRFKRCSLRNKTQKCDPEK
GIYIEFGSDSSEEIFKQADNTGLEDKEALKISSQEKLEELKSAEKGKAYSCSTQPDKLGD
KEIILPNVVGESDFSKEGLSKKSTWSIPEYAKPGQVNITEYQSSPLNVHAVDLLTEQCDR
IGNASPLRNGDTSFFKNTEEMNAEKTQCNSKSKDFDLKDSSESTLDKSKEMDTVAQSVKA
VEMYDPEKDSFNEKELPLEKLLQPETFHCAIPNQVSRKRLKRSIQKVNEWFSKSNEIMSS
NSSQDDSAGASDVSGEGDTFLSDKDSCISAKTDTMVDSLEIAVVEGNRRLSKQTADSIKD
KIFGKTYKRGRKSKAPIILRDILPTTKKEDVADKCLNNSSKDRLKRKRKTSYVLQPEDFI
KKDTEEAGECPQSVDQCLGNAENKRYKESSVSESQLSENREDNTLAELEEGGGSICKKAT
KKVTGKHCDGELELSDCDPKSTKKSSSAAKRCKRSARTMCVLQLVDRNSVSPDPTEPRID
SYPSSEEPRKVDSEQRQVRHSRRLQLLSEEITKTGTGVVIKGARKYDSDHEGSSFAVQRN
VLFHTSECKDLCEPQDTLSYRPLSNLKGHDLEANEIQISLKNSFDTAETRKSLFSPTSSG
QRSSCRSFAPDTGSQGEGVGGPLLLQSPSITVVQTVSHPTEEVTESGTAFLQDSEHDTQN
NPGGFRTEKSPMVKDVLELTNEAEDSELDTQYLRNIFRHSKRLSFSLYPTPMKACAVEDA
AFATLKISCADQVENKHSKYFKTEGLQEEKMTVESLSRVCEKDKLKTNESACVCPVTCFV
SNTECLPTSEHKEDASQVANQGNLTPIIMGTARIEDKNRLQKVEQGNKKTVSTDTGIESK
LRQNPVKSNKSHSDESNTEEHVFEITDLNTVDEICFSSESNQAGKAKVVDSEEPILRFQS
RSVISPATCQQRAAEVSCEVTGKSSKRERKQEKRNEKQATQTGSTGMPACLVTEALEDHL
KGNNDFTGFSETPDGLLCCDDDTEENISFSETDRERSAVFVKSDNALIKEPRNRNVRTKP
TSQGIQRSRRRAQKLQSSDEESSEEEELPCFQTLIFGKSESTPLQINKEVASVVESLVSP
ITLPHDGSHDDNNKQKMPEAAVSNGCVSPSQESECSVNLFSSQSNVSEESVGAQDLKKPL
IQVNTSKQGSNVNESEETFQSCNGGLKRSKTIFRDECQDDPNMRANLGEVSGYDSETSYV
EDSCGAFSQGEILTTQQKNAMQNNLKKLQQEMAVLEAVLNQHGSQDREFLPLHRELPHSS
SERTLGMEEMRQRGAESTSEGNFENHKCSSSKGFSVYDFHVIPSDSLNSKIKELNKERSQ
ELLLPSSKSCLLKRPDLKKGLQCDSVLKNKAATEKTKPLQEAVQECSHCRLEAENADEQK
SGTRLNSASVLSNLSGNVTRSPNNSFSSVTLLKPRTAEATDSSVVAQNANKGCAQECKSK
RSVCFPISVLYNTAGKENATSAVVTNRKGMSIVASGLNQSEHLVVWKFARQTQSTLSNHI
TEGTTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILDEENFEVRGDV
INGRNHQGPKRARESLTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGASVVKQLHLFTH
TTNSTAVVVVQPDAWMENTDYRAIQQKDNIAMVTREWVLDSVACYECQEFNAYLVS
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtcagtgattgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcctggatatggtagaagagccagtttcaacaaaatgtgat
cacatattctgcaggttttgcatgttcaaactcctcagcaaaaagaaaaaaggtgtgata
cagtgtcctctgtgtaagactgacgttaccaagagaagtctgaaagaaaatcccagattt
aagcagctaattgactcattgttggaaactatgcatgcatttgagcttgacactggagta
aagtttttaaacagtcatcgctttcctaaaacatccacagaaaccacttctgctgagttc
ctgtgtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggaaaaaaagtgcc
aaagaaaatggacaagaaaacttcaccttgcatgaagctaatgtggatacacagcttaca
gataccaggttcaaaaggtgttccctaagaaacaaaacccagaaatgtgaccctgaaaag
gggatttatatagagtttggctctgattcatctgaagagatttttaaacaagcagacaat
actgggttagaagacaaagaagcactcaagatttcatctcaagaaaagctagaagaactt
aagagtgctgagaaggggaaagcatattcttgcagtacacagcctgacaagttgggtgat
aaagaaataattctaccaaatgtcgtaggtgaaagtgatttctcgaaggaaggcttgagc
aagaaaagcacttggagcatccctgaatatgccaaacctggccaagtgaatataactgaa
taccagagttctcctttaaatgttcatgctgtagatctactcacagaacagtgtgacaga
ataggtaatgccagtcccttaaggaatggggacacatctttctttaagaacacagaagaa
atgaatgcagagaaaactcagtgcaatagtaaaagcaaagactttgacttaaaagatagc
tcagagagcaccttggataaaagcaaggaaatggatactgttgcacaaagtgtaaaagct
gtggaaatgtatgatcctgagaaggattctttcaatgaaaaagaacttcctctggagaag
ctacttcagccagagacgtttcactgtgccattccaaatcaagtttctaggaagaggctg
aagcgaagcattcagaaagtcaatgaatggttttcaaaaagcaatgagattatgtcttcc
aattcttcccaggatgattctgctggagcaagtgatgtttcaggtgaaggagatacattt
ttatcagataaagattcctgtatttcagcaaagactgacactatggtagattccctggaa
attgcagtggttgaaggaaacaggagattgtcaaaacaaacagcagatagcatcaaagac
aaaatatttgggaaaacgtacaagagagggaggaaatcaaaagcccctattattttgaga
gacattttacctactacaaaaaaggaagatgtggctgataagtgcttgaataattctagc
aaagacaggctaaaacgaaaaaggaagacttcctatgtcctgcaacctgaggatttcatc
aaaaaagatacagaagaggcaggtgagtgccctcagagtgttgaccagtgccttggaaat
gctgaaaataaaagatataaggaaagttctgttagtgagagtcagctctcagagaataga
gaggataacacattagcagaacttgaggaaggaggaggatccatatgcaaaaaagctact
aaaaaggtgactggcaagcactgtgatggggagctagaactgagtgactgtgatccgaaa
agcaccaagaaaagtagttctgcagcaaaaagatgcaagcgttctgctagaaccatgtgt
gttctacagctagtggatagaaactctgtttcccctgatccaactgagccgcggattgat
agctatccaagcagtgaagaaccaaggaaagttgattctgagcaaagacaagttaggcac
agcaggaggcttcagttactttctgaagaaataacaaaaactggaacaggagtagtaatt
aagggagcaagaaagtatgatagtgatcatgaaggatcttcctttgcagtccaaaggaat
gtgttatttcacacttctgaatgcaaagacctgtgtgaaccccaggatacactgagttac
aggccacttagtaatctgaagggtcatgatctggaagcaaatgaaatacagattagtcta
aagaattcatttgacactgcagaaactagaaaaagtctattcagccctacatcttcaggt
cagcgttcaagttgtagatcctttgcacctgatacaggttctcaaggtgaaggagtaggt
gggcctttgctcctacagtctccttcgataactgtcgtacaaactgtttcccacccaact
gaagaggtgactgaatcaggtactgcttttctccaggatagtgaacatgatacccaaaat
aatccagggggcttcagaactgagaagtcgccaatggttaaagatgttttggaattgacc
aatgaagctgaagatagtgagctagatacacagtatctgcgaaatatatttaggcattca
aaacgcctatcatttagcctttatcctactcccatgaaggcatgtgcagtagaagatgct
gcttttgcaactttaaagatatcgtgtgctgatcaggtagaaaataaacatagcaaatat
tttaaaacagaaggcttgcaggaagagaaaatgactgttgaaagcttgagtagggtttgt
gagaaagataagcttaagaccaatgaatctgcttgtgtttgtcctgtgacttgctttgtc
agcaacactgaatgtttgcccaccagtgaacataaagaagatgcttcacaggttgcaaat
caagggaatctgacaccaataataatgggtactgctaggattgaagacaaaaacagattg
caaaaagtagagcagggaaacaaaaagacagtgtcaactgacacaggaatagaaagcaag
ttgagacaaaatccagtcaaaagtaataaaagccacagtgatgagagtaatacagaagag
cacgttttcgaaataactgatttaaacacagttgatgaaatatgcttcagttcagaaagc
aatcaagcaggaaaggccaaagttgtagacagcgaagaaccaatactacgttttcagtct
aggtcagtaatttctcctgcaacttgtcagcaaagggctgctgaagtcagctgtgaagtc
actggaaaaagtagcaaaagagaaagaaaacaagaaaagaggaatgaaaaacaagcaact
caaactggtagcacagggatgcctgcgtgtttagttacagaggctctagaagatcatctt
aaaggaaataatgattttacaggtttttctgaaacccctgatggcttactgtgctgtgat
gatgatactgaagagaacatcagcttttctgaaacagatagagagagatctgctgtgttt
gtaaaaagtgacaatgccctgataaaagaaccacgcaataggaatgttagaactaagcca
acatctcaaggtattcaaagatctcgaagaagagcgcagaaactgcagtcttcagatgaa
gaatctagtgaggaggaagagctgccatgttttcagacattaatatttggcaaatcagaa
agcacaccgttgcagatcaataaagaggtggcatctgtggtagagtctttagtaagtccc
atcacactgcctcacgatggaagtcatgatgacaataataagcagaaaatgcctgaagct
gctgtaagtaatgggtgtgtttcaccaagccaggagtcagaatgctctgtcaacttattt
tcttcccagtccaatgtgtctgaagaatcagttggagcacaagatctgaagaaaccttta
atacaagttaatacatccaaacaaggtagcaatgtgaatgaaagtgaagaaacttttcaa
agttgtaatggagggctgaagagaagcaaaactatcttcagagatgaatgccaagatgac
ccaaacatgagagcaaacctaggagaagtatctggatatgacagtgaaacaagttatgta
gaagattcgtgtggagcattctctcagggtgaaatccttactacacaacagaagaatgct
atgcaaaataacctaaaaaaacttcagcaagaaatggctgtactcgaagcagtgctaaat
cagcacggaagtcaggaccgtgaatttttacctctccatagggaactgccacattcgagt
agtgaaagaacacttggaatggaagaaatgagacaaagaggggcagagtcaacctcagaa
ggaaattttgaaaatcacaaatgcagcagttcaaagggattttcagtctatgatttccat
gttatcccaagtgattctctcaacagtaaaatcaaagagttgaacaaagaaaggtctcaa
gaattgttgcttccatcttctaaatcctgtttgttaaagagaccagatttgaagaaaggc
cttcaatgtgacagtgttctgaagaacaaagctgctactgaaaagacaaaacctttgcag
gaggcagtgcaagaatgtagtcactgtcgccttgaagcagaaaatgcagatgagcagaaa
tctgggaccaggctaaacagtgcatctgtcttatcaaatctctctggaaatgtgaccagg
agtccaaataactctttctcctctgtaacgcttcttaaacctcgaactgcagaagcaaca
gatagttctgttgtagctcagaatgctaataaaggctgtgctcaagaatgtaaatccaag
agaagtgtgtgttttcctatatctgttctgtacaatacagctgggaaagaaaatgctaca
agtgcagttgtgactaacaggaaaggaatgtcaattgttgcatcaggtctgaatcaaagt
gaacatttggttgtttggaagtttgcgagacaaactcagagcactttatctaatcacatt
acggaaggaacaacccatgtcataatgaaaacagataaggagctggtgtgtgaacggaca
ctgaagtactttctgggtattgcaggaaggaaatgggtagttagttatcagtgggtaatt
cagtcttttaaagaaggaaggatactggatgaggagaacttcgaagttagaggagatgta
atcaatggaagaaatcatcaaggtcctaagagagctagagagtctctgactgaaaagatc
tttaaagactttgagatctgttgctatggacctttcactgatatgactacagaacatcta
gaatggatggtggagctttgtggtgcctccgttgtgaagcaacttcatttgttcacacac
acaacaaattctactgctgtcgtggttgtgcagccagatgcttggatggaaaacacggat
tatagagcaatccagcaaaaagacaacattgccatggtaactcgagagtgggtattagac
agtgttgcttgctatgagtgccaagagttcaatgcctaccttgtgtcctga
DBGET
integrated database retrieval system
