Tyto alba (Barn owl): 104360113
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Entry
104360113 CDS
T07816
Symbol
DDX58
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04622
RIG-I-like receptor signaling pathway
tala04623
Cytosolic DNA-sensing pathway
tala05164
Influenza A
tala05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104360113 (DDX58)
04623 Cytosolic DNA-sensing pathway
104360113 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104360113 (DDX58)
05168 Herpes simplex virus 1 infection
104360113 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tala04054
]
104360113 (DDX58)
Enzymes [BR:
tala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104360113 (DDX58)
Pattern recognition receptors [BR:
tala04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104360113 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_25
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
104360113
NCBI-ProteinID:
XP_032856876
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MTAEEKRSLQCCRRYIEKSLNPIYILGNMTDWLSDEVKERVRKEEEKGVTAAAALFLDAI
LQLEVEGWLRAFLDALVAVGYTGLAEAIETWDFSKLEKLELHRQLLKRIEATMLEVDPVA
LMPYINTCLIERECDEILQISEYRSKAAGITKLIECLCRSDKENWPKSLQLALDNAGYYN
ASELWDMREDNGKVFDGEMTDASENSFETTITFSEEAECDNNLSENLCSASEGTCQFSPV
DEPKEARSYQTELAQPAINGKNTLICAPTGTGKTFVALLICEHHFQNTFLGRKAKVVFLA
TKVPVYEQQKTVFKQHFERSGYSVQGISGETVANVSVEKVIQDSDIIVLTPQILLNSIEE
GIVSSLSIFTLMIFDECHNTTGNHPYNVLMTKYLQQKFGSSANQLPQIVGLTASVGVGNA
KTVEETVEHICTLCSYLDIQTISTVRENKEELQRFTNKPETFVRWVNMRVQNHFADIISG
LMSETEALMRKIYSVDTISQINKNDFGTQKYEQWIVATQKKCKLLQLADKEKESSICRDL
FICTEHLRKFNDALIISEDARIEDALAYLTEFFTNVKNGPYTELEKQLTAKFQENEPELT
ALSKDESNENPKLEELASILDEAYRYNPQTHTLLFAKTRALVAALKKWVEGNPLLSHIKT
DVLMGHGRRDQKTGMTFPMQKGVLDAFKTNKDSRLLIATSVADEGIDISECNLVVLYEYF
GNISKMIQVRGRGRAKGSKCILVTSKTEVVENEKHNRYKEEMMNEAIEELQNWDETTFVR
KIHDLQMKEKVLRDYRKKETRCTVVEGEKNLLCGKCKVYACSTGDIRVIKKSHHTVLGDA
FKERYITKPHQKPVQFDCFEKKSKMHCQNPNCQHDWGIIVKYKTFDNLPVIKIKSFVVEN
TETGTQMDLQKWKNINFSLKSFDVEETSS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaggagaagaggagcctgcagtgctgcaggcggtacatcgagaagagcctg
aaccccatctacatcctgggcaacatgacggactggctgtccgacgaggtgaaggagaga
gtccgaaaggaggaggagaagggggtgacggcggccgccgcgctgtttctggatgccatc
ctgcagctggaggtggagggctggctccgggccttcctggacgccctggttgcagtaggt
tacactggattggccgaagcaattgaaacctgggacttcagcaaactggaaaaactggag
ttgcacaggcagctcttgaagcggatagaagcaacaatgctagaagttgatccggtagca
ctcatgccttacataaacacatgcctgatagaaagggagtgtgatgagatcctgcagatt
agtgaatacagaagcaaagcagctggaataactaaactcattgaatgtctctgtcgatcg
gataaggaaaactggccaaaaagccttcagctggcactagataatgcaggatattacaat
gcaagtgaactgtgggatatgagagaagataatggcaaagtttttgatggtgaaatgaca
gatgcttctgagaacagctttgaaaccacaattacattctctgaagaagcagaatgtgat
aataatctcagtgaaaatctgtgctcagcttcagaggggacctgtcagttttcacctgtt
gatgaaccaaaggaggctcggagctaccagactgagcttgcgcagcctgctatcaatggg
aaaaacacattgatatgtgccccaacaggaactggaaaaacttttgtggcacttctgatt
tgtgaacatcatttccaaaacacgttcttgggacgaaaggcaaaagttgtctttcttgca
accaaagtgccagtgtacgaacaacagaaaactgtattcaaacagcattttgaaagaagt
gggtactctgttcaaggaattagtggtgaaacagttgcaaatgtctctgtagaaaaggtt
atacaggacagtgacatcattgtgctaacgccccagattcttctgaacagcatcgaggaa
gggatcgttagctccctctctatcttcactctgatgatatttgatgagtgccacaacact
acaggcaaccacccttacaatgtgttaatgaccaaatacctgcaacaaaaatttggctcc
tctgcaaaccaactgcctcagattgtaggtttaaccgcttctgttggagttggtaatgcc
aagactgttgaggaaacggtagagcacatctgtaccctctgctcctaccttgacatacag
accatatccactgtcagagagaacaaagaggagctgcagagattcacaaacaagccagaa
acgtttgtcagatgggttaacatgcgagttcagaatcacttcgcagacattatctcgggt
ctgatgtctgagacagaggcattgatgaggaagatttactcagtggatactatctcccaa
atcaacaagaatgattttggaacacagaaatatgaacagtggatagttgccactcagaag
aaatgcaaactgttgcaactggcagataaggagaaggagagcagcatttgtagagacctt
ttcatttgcacggaacacctgcggaaattcaacgatgctctcatcatcagcgaagatgcc
cgcattgaagatgctttagcctacctaactgaatttttcacaaatgttaaaaatggacca
tatacagagttagagaagcaactgacagccaaatttcaagagaatgaaccagaactgact
gccctttcaaaagatgaatcaaacgagaatcccaagctggaagagcttgcttccatactg
gatgaagcataccgctataacccacagactcacactcttctctttgctaagacaagagca
ttagtagctgctttgaagaagtgggtggaaggaaaccctctgcttagccacataaagaca
gatgtgttgatgggtcatggaagaagagatcaaaaaacaggtatgaccttcccaatgcag
aagggtgtactggatgcattcaaaaccaacaaagacagcagactgctaattgctacatca
gttgctgacgaaggcattgatatttctgagtgcaaccttgttgtgctctatgaatacttt
ggtaatatcagcaaaatgatccaagtcagaggtcgtggaagggcaaaaggcagcaagtgc
atccttgtgacaagcaaaacagaagtggttgagaatgagaaacacaaccgttataaagaa
gaaatgatgaatgaagctattgaagagctacagaattgggatgaaacaacatttgtaaga
aagatacacgacctgcaaatgaaggaaaaggtactacgagattacaggaagaaagaaaca
agatgtacagtagtggaaggagaaaaaaaccttctgtgtggaaaatgcaaagtgtatgcc
tgtagtacaggtgacatcagagttataaagaaatctcatcacactgtcctaggagacgca
ttcaaggaacgttatataacaaagcctcaccagaaaccagtccagtttgattgttttgag
aaaaaaagcaagatgcattgccaaaatcctaattgccaacatgactggggaatcatagtg
aagtacaagacatttgataatctaccagtgatcaaaatcaaaagctttgtagtagagaac
actgaaactgggacacaaatggatcttcagaaatggaaaaatattaatttttcactgaag
agttttgatgttgaagaaacatccagctga
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