Tyto alba (Barn owl): 104362883 Help Entry 104362883         CDS       T07816                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism tala  Tyto alba (Barn owl) Pathway tala04115   p53 signaling pathway tala04145   Phagosome tala04148   Efferocytosis tala04350   TGF-beta signaling pathway tala04510   Focal adhesion tala04512   ECM-receptor interaction tala04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tala00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     104362883 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104362883 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     104362883 (THBS1)    04148 Efferocytosis     104362883 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     104362883 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     104362883 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104362883 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tala04131]     104362883 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tala00536]     104362883 (THBS1) Membrane trafficking [BR:tala04131]  Endocytosis   Phagocytosis    Opsonins     104362883 (THBS1) Glycosaminoglycan binding proteins [BR:tala00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104362883 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS cEGF Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  104362883 NCBI-ProteinID:  XP_042647118 LinkDB All DBs Position Unknown AA seq 1177 aa AA seqDB search MGPAAVLFLLLLTLGVSEAKRTAESRSDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPE SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGS GHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEK MENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTL QDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSC PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP CEGEARENKPCQKDPCPINGNWGPWSPWDACTVTCGGGLQRRSRLCNNPEPQYGGKTCVG EPRGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECR EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGIQPFGRSVEDAMANKQVCKPRNPCTDG THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC KKDNCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR CDNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC DNCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDIS ETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atggggccagcggctgttctcttcctcctcctcctcacgctcggtgtctcggaggccaag cgcactgcagagtccaggagtgatgataacagtgtctttgatctctttgaactcatcggc ttcattcggaagggagctgggcgtcgggcacccggggtgcacctggtgaagggaccagaa tcctccagccctgcttaccgcattgaagatgccagtcgcatccccgctgtccctgactcc aagttccaagacttgttagatgccatccatgctgagaaaggcttcatcctcctggccacc ctccggcaagccaagaagagtagaggcacgctgctgtctgtggaacagaaagatggctct ggtcatgtcttcagtctagtatcgaatggcaaggcaggcaccctggacctgagcctttct ggtgatggcaagcagcaattagtgtcagtagaggacgccttgctagctacaggacactgg aagaatatcaccctgtttgtgcaggaggaccgggctcagctctatgtgggatgtgagaaa atggagaatgctgaactggacatccccatccaaaacatcttcactagggacctggccagc agtgccaggctccgtattgccaaagggggagtcaatgacaacttccagggactgctgcag aatgtgcggtttgtgtttggaacaactctggaaactattctgaggaacaaaggctgctcc agctccactagtgccatcattactttggacaaccccatcaatggttccagcccagctatc cgtactaattacattggccataaaacaaaggacatccaagcagtctgtggtttttcatgt gatgaattaacaaacatgtttgtggaactgcaagggctccggtccatggttacaacactt caagatagagttcgcaaagtgaccgaagaaaatgaacttattgccaaagtggtccagatc actcctggagtctgcattcataatggaatcttgcacaaaaataaagaagagtggactatt gacagctgcactgaatgtacctgccagaactctgccactatatgccggaaagtgtcctgt ccactcatgccttgttccaatgccactgtgcctgatggggagtgctgcccccgatgctgg cctagcgactatgcggatgatggatggtctccttggtctgaatggacttcgtgttctgtg acctgtgggaatgggattcagcagagagggcgatcctgcgacagtctcaataaccgctgc gaagggtcttctgtacagactcggacttgccacctgcaggagtgtgataagagatttaaa caggatggtggttggagtcactggtcaccatggtcatcatgttctgtcacttgtggcacg ggcatcattactagaattcgtctctgcaactctccagtaccacagctgaatggcaaacct tgtgagggtgaggcaagagaaaacaaaccctgccagaaggatccttgcccaattaatggc aactggggaccgtggtctccatgggatgcttgtacagtgacatgtggaggaggacttcaa agacgtagccgtctctgcaataatcctgagcctcagtatggtgggaagacttgtgtaggt gaacctagagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctgtct aatccctgctttgcggggactacatgtaccagctcccctgatggttcctggaagtgtggt gcttgtcctgctggctaccatggtgatggtgtccactgccaagatattgatgagtgcaga gaggttcctgatgcctgctttgtcttcaacggagtgcacaggtgtgagaatactgaacct gggtacaactgtctgccttgcccaccacgtttcactgggatacagccatttggtcgcagt gttgaggatgccatggctaacaaacaggtctgcaaacctcgtaatccatgcacagatgga acacatgactgcaacaagaatgccaaatgtaattatcttggccactttagtgaccccatg tatcgttgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatact gacttggatggatggccaaatgagaatcttgtttgtgttgccaatgccacttaccactgt aaaaaagataactgccctaatctgcccaactctggacaggaagactatgataaggatggg attggtgatgcctgtgacagcgatgatgatgatgatggtattcctgatgaccgggacaac tgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccgc tgtgataactgcccctacaatcacaatcctgatcaaactgacactgacaacaatggagaa ggagatgcatgtgcagtggatattgatggagatggggtccttaatgaaagggacaattgc caatatgtctacaatgtggaccagagggatacagacttggatggtgttggagatcagtgt gataactgcccactagaacacaatcctgaccaggaagacaccgattctgaccgcataggt gatgagtgcgacaacaaccaggacatagatgaagatggccatcaaaataatcttgataac tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc tgtgaccatgatgatgacaacgatggcatccctgatgacaaagataactgcagattggtt gctaatccagatcaagctgattctgatggtgatggacgtggtgatgcttgcaaagatgac tttgaccaagacagtgtgccagacattgatgatatctgccctgaaaacgtggacatcagt gagactgatttccgaagatttcagatgattcccctggatcccaaaggaacatcccaaaat gatccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgac cctggccttgcagttggttttgatgaattcaatgctgtggacttcagtggcaccttcttc atcaatacagaaagggatgatgattatgctggctttgtatttggctaccaatcaagcagt cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacc aaagctcaaggctactcaggtctttccatcaaagttgtgaattccaccactggcccagga gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttg tggcatgaccctcgtcacataggctggaaagacttcactgcatatagatggcgtcttagc catagaccaaagactggctacatcagggttgtaatgtatgaagggaagaaaatcatggca gactcaggacccatctatgataaaacctatgctggtggtcggctagggttatttgtcttc tctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa

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