Tyto alba (Barn owl): 104369526 Help Entry 104369526         CDS       T07816                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism tala  Tyto alba (Barn owl) Pathway tala04010   MAPK signaling pathway tala04120   Ubiquitin mediated proteolysis tala04140   Autophagy - animal tala04144   Endocytosis tala04517   IgSF CAM signaling tala04620   Toll-like receptor signaling pathway tala04621   NOD-like receptor signaling pathway tala04622   RIG-I-like receptor signaling pathway tala05132   Salmonella infection tala05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:tala00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     104369526 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104369526 (TRAF6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     104369526 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     104369526 (TRAF6)    04140 Autophagy - animal     104369526 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     104369526 (TRAF6)    04621 NOD-like receptor signaling pathway     104369526 (TRAF6)    04622 RIG-I-like receptor signaling pathway     104369526 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     104369526 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     104369526 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tala04131]     104369526 (TRAF6)    04121 Ubiquitin system [BR:tala04121]     104369526 (TRAF6) Enzymes [BR:tala01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104369526 (TRAF6) Membrane trafficking [BR:tala04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     104369526 (TRAF6) Ubiquitin system [BR:tala04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104369526 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-TRAF_2 zf-C3HC4_3 zf-C3HC4_4 SlyX zf-RING_5 Sina_ZnF PspA_IM30 Med21 RING_XB3-XBAT31 TRAF3_RING CCDC18_1st zf-RING_11 Spc29 ATG16 CCDC39 CENP-F_leu_zip U-box HAP1_N CEP104_ZnF UPF0242 TMF_TATA_bd DUF2247 DUF16 CEP135_N HMMR_N AAA_13 DUF1664 ZapB_rel DUF4618 DM ADIP Motif Other DBs NCBI-GeneID:  104369526 NCBI-ProteinID:  XP_032866894 LinkDB All DBs Position Unknown AA seq 543 aa AA seqDB search MSLLYSDNSRGARDMESGCCAAMASACSAGAKEDSVGSSTGNPPSSFTEETQGYDVEFDP PLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNF AKREILSLMVKCPNKGCNMKMELRHLEDHQLQCDFSTVDCPQCQGALQKNHLKEHMTQEC PRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPVPC FYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTATNPVPFINGLPFEPALFS HMSHAAYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHIAELKRTIRNLEG KVTEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPN AQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAF QRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARSAD GAV NT seq 1632 nt NT seq  +upstreamnt  +downstreamnt atgagcttactatatagtgataacagtcgtggagcccgagacatggaaagtggctgctgt gcagccatggccagtgcctgcagcgccggagcaaaagaagacagcgttggcagcagcact ggaaaccctccaagctctttcacagaggaaacacaaggatatgatgtggagtttgatcca cccttggaaagtaaatatgaatgtccaatctgcttgatggcccttcgggaggcagtacag acaccgtgtgggcaccgtttctgcaaaggctgcattgtcaaatcaataagagatgcaggt cacaaatgtccagtagacaatgaaattctgcttgaaaatcaactttttcctgacaacttc gctaaacgagaaatcctttcattaatggttaagtgtcccaacaagggctgcaatatgaag atggagctgaggcatttagaggaccaccagttgcagtgtgatttttccactgtggactgc ccgcagtgccaaggagccttacagaagaaccatctgaaagagcacatgacacaggagtgt ccgaggcgtcaagtctgttgtccaaactgtgccacatctatggcctatgaagataaagag cttcatgaccagacctgcccactcgccaatgtattttgtgaatattgcaacaccgtgctc atcagagagcagatgcctaaccattatgacaatgactgtcctactgccccagtgccatgt ttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacgacacatg caggagttcacccaggttcacatgagaatgatggctcagagttttcagaatatcagtgtt actgctacgaatcccgtacccttcatcaacggcctaccctttgagcctgccctcttctct cacatgtcgcatgccgcatatgattgtaatccagaagttgaaaacttcaaagaaactatt cagcagttggaaggtcgtctggtaagacaagatcaccaaatcagagagctcattgctaaa atggagactcaaaacactcacatagcagaactcaaacgtactatccgaaatttggaggga aaggttactgaaatggaggcacagcaatgtaatggtatttatatctggaagattgagaac ttcagtggacttcagaaagcccaggaggaagagagacctgttgtgatgcacagtcctggc ttctacactggaaagcccggctacaagctgtgtttgcgcctacatatccagttaccaaat gctcagcgttgtgctaattttatatctctgtttgtccacactatgcaaggagaatatgac agccatctgccttggcctttccaaggcactatacgactttctattttggatcaatcagaa ggccctgaaaggcagaatcatgaggaagtaatggaagccaagccagagttactcgccttc cagagaccgacaattcaccgcaatccaaaagggtttggttatgtgactttcatgcacctg caaaccttgaaacaaagaaccttcgtaaaggatgacacccttctggtgcgctgtgaagtt ctaacgcgtctagatttaaacagtctccgcagggaaggatttcaagctcgcagtgctgat ggagctgtgtag

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