Terriglobus albidus: FTW19_04745
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Entry
FTW19_04745 CDS
T06135
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
talb
Terriglobus albidus
Pathway
talb03030
DNA replication
talb03410
Base excision repair
talb03420
Nucleotide excision repair
talb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
talb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FTW19_04745 (ligA)
03410 Base excision repair
FTW19_04745 (ligA)
03420 Nucleotide excision repair
FTW19_04745 (ligA)
03430 Mismatch repair
FTW19_04745 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
talb03032
]
FTW19_04745 (ligA)
03400 DNA repair and recombination proteins [BR:
talb03400
]
FTW19_04745 (ligA)
Enzymes [BR:
talb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FTW19_04745 (ligA)
DNA replication proteins [BR:
talb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FTW19_04745 (ligA)
DNA repair and recombination proteins [BR:
talb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FTW19_04745 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FTW19_04745 (ligA)
MMR (mismatch excision repair)
DNA ligase
FTW19_04745 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FTW19_04745 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
HHH
PTCB-BRCT
BRCT_2
RNA_pol_A_CTD
HHH_3
HHH_8
DUF72
DUF948
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QEE27377
UniProt:
A0A5B9EAT2
LinkDB
All DBs
Position
complement(1159265..1161376)
Genome browser
AA seq
703 aa
AA seq
DB search
MSVESKIEARIESLREALRHHEYLYYVEDSPEILDAEYDTLMNQLKALEAEHPELITPDS
PTQRVGGRPKEGFAKVAHSRPMLSLDNAYNEAELRAWADRVHAALPAGETVEFVCELKLD
GLSLALHYGASANGASVLQRGLTRGDGTTGEDVTTNVRTIRSVPLAVSAAKLKKAGMPQQ
FEVRGEVVMPQAAFQRMNEEAVAAGLPVKANPRNAAAGTIRTLEPNIVAQRRLDFYAYFL
LREGETLLPGQQETLDALKTAGFRVNMHGSSAKTIDTVLKFIEKAEAQRDDLGYEIDGVV
VKVNSTAQQARLGFTGKAPRWAIAYKFAARAGVTQLKGVGFQVGRTGKLTPVARLTPVFI
GGTTVSNATLHNADEIQRLGVRIGDWVQVERGGDVIPKIVKVDESHPRGTEEIEFPTHCP
VCDEPVVREEGEVDWRCVNASCPARLREELLHFASRGVMNIEGLGDALVAQLLGQAEMAP
AEGEEEAAEPVARKALIHSVADLYTLTMDQLLTLERIGQKSAQTLLDEIERSKKNPLWRV
LLGLGIRHVGERTAQLLAEEFASRGQDYEAMQALMDATEEELQRVPEIGPKVAEAIHEFF
AGHKNRQLVERLHKLGFSFTAEKRQKTSQLEGMTFVLTGTLPTLKREDAKTMIEAAGGKV
SGSVSKKTTYVVAGDEAGSKLDKANELGVKVIDEAALLAMFGQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgaatccaagatcgaagcccgaatcgaatcgctgcgcgaagccctgcgtcac
cacgagtacctgtactacgtcgaggactctcccgagatcttggacgctgagtacgacact
ctgatgaaccagttgaaagctctggaggcggagcatccagagctgatcacacccgactcg
ccaacgcagcgcgtcggcgggcgcccgaaagaaggttttgccaaggtggcgcactcgcgc
cccatgctctcactcgataacgcctacaacgaggcggagctgcgcgcctgggccgaccgt
gtacatgccgcactgcctgcaggtgagacagtcgagttcgtctgcgagttgaagctggat
ggcctctcgctggcgctgcattacggagcttcagcgaatggagcctccgtactgcaacgc
ggcctcacacgtggcgacggtacgacaggcgaagacgttacgaccaatgtccgtaccatc
cgtagcgtgccccttgcggtctctgccgcgaagctgaagaaggccggcatgccgcagcag
ttcgaggtccgcggtgaagtggtgatgccgcaggccgccttccagaggatgaacgaagag
gcagtcgcggcgggtctgccggtaaaggcgaacccacgcaatgccgccgccggcacaatc
cggacactggaaccaaacatcgtcgcccagcgtcggctcgacttctacgcctacttcctg
ttgcgcgaaggcgagacacttctgccgggccagcaggaaacgctcgatgccttgaagacg
gcgggcttccgcgtgaacatgcatggctcctccgcgaagaccatcgatacagtcttgaag
ttcattgaaaaggccgaggcccagcgtgacgatctcggttacgagatcgatggtgtcgtc
gtaaaagtcaattcaacggcacagcaggcgcggctgggatttaccggcaaagctccacga
tgggcgatcgcctataaatttgcagcccgtgcaggcgtgacgcaattgaagggcgttggc
ttccaggtaggacgcaccggcaagctgactcctgtagcgcgtctgacacctgtcttcatt
ggcggcaccaccgtcagcaatgcaacactgcacaatgccgacgagatccagcgtctgggt
gtgcgcatcggcgactgggtgcaggtcgaacgcggcggcgatgtgattccgaagatcgtg
aaggtggacgagagccatccacgcggaaccgaagagattgagttcccgacacactgcccg
gtctgcgacgagcccgtcgttcgtgaggaaggcgaggtggactggcgctgcgtcaatgcc
agttgcccggcacgcctgcgcgaagagctgctgcacttcgcatcgcgcggtgtaatgaat
atcgaaggtctgggagatgcgcttgtcgcgcagctactcgggcaggcagagatggccccc
gccgaaggggaggaagaggccgcggaaccggtcgctcgcaaggcgctgatccattccgtc
gccgatctgtacaccctgacgatggatcagttgctcacgctggagcgaatcggtcagaag
tcggcgcagacactgctggatgagatcgagcgctcgaagaagaatccgctgtggcgtgtc
cttctgggtctgggtattcgtcatgtcggcgaacgcaccgcacaactgctggccgaagag
tttgcctcacgcgggcaagactacgaggccatgcaggcattgatggatgccaccgaagaa
gagctgcagcgcgtgcctgagatcggtcctaaagtcgcggaggccattcatgagttcttc
gcgggccacaagaaccggcagctcgtagagcgtctgcacaagcttggcttcagctttacc
gcggaaaagcgtcagaagacctcccagcttgaaggcatgaccttcgtactcactggaacg
ctgcctacactcaagcgcgaggatgcgaagacgatgattgaagcagccggaggaaaagtc
tcaggctcggtcagcaagaaaacaacttatgtcgtcgcaggagatgaggcggggtcgaaa
ctggacaaggccaacgagctcggtgtgaaggtgattgatgaagccgcccttctcgccatg
tttggtcaatga
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