Thermobifida alba: FOF52_18060
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Entry
FOF52_18060 CDS
T08159
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
talx
Thermobifida alba
Pathway
talx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOF52_18060 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
talx03400
]
FOF52_18060 (nth)
Enzymes [BR:
talx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FOF52_18060 (nth)
DNA repair and recombination proteins [BR:
talx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOF52_18060 (nth)
Prokaryotic type
FOF52_18060 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
UPT22618
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All DBs
Position
4084555..4085331
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AA seq
258 aa
AA seq
DB search
MSRDVYTSSSSPSAGGDAPSTERDTPTGETRLALVRRSRRINRELARMYPDAHCELDFTT
PLELLVATILSAQCTDRRVNQVTPVLFARYPSAADYASADQEELEGIIRSTGFYRSKARN
IIALGQQLCDEHGGEVPDTLEDLVKLPGVGRKTANVVLGNAFGVPGLTVDTHFGRLVRRF
GMTRQTDPVKVEQEIAALFPPKEWTMLSHRLIWHGRRVCHARRPACGACEVHHLCPSYGE
GPMDEETARRLVRTGPFS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccgcgacgtatacacttcctcctcctccccgtcggccggcggcgacgcgccctca
acggagcgcgacacccccacgggtgagacccgtctcgctctggtgagacgttcccgacga
atcaaccgggaactggcgcggatgtatcccgacgcacactgtgagcttgatttcactact
cccctggaactcctggtggccaccatcctctccgcccagtgcaccgacaggcgggtcaac
caggtgaccccggtgctgttcgcccgctacccctcggcagccgactacgcgtcggccgac
caggaggagctggagggcatcatccgctccaccggcttctaccggtccaaggcgcgcaac
atcatcgccctgggccagcagctgtgcgacgaacacggcggcgaggtgcccgacaccctg
gaggacctggtgaaacttccgggggtcggacgcaagaccgccaacgtggtgctgggcaac
gccttcggcgtgcccggactcaccgtggacacccacttcgggcggctcgtgcgccggttc
ggcatgacccggcagaccgacccggtgaaggtcgagcaggagatcgccgccctgtttccc
cccaaggagtggacgatgctgtcacaccggctcatctggcacggccgccgggtctgccat
gcgcgccgcccggcctgcggcgcctgcgaggtccaccacctgtgcccctcctacggagag
gggccgatggacgaggagaccgcgcggcggctggttcggacggggccgttctcatga
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