Temnothorax americanus: 143899211
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Entry
143899211 CDS
T11456
Symbol
Dnalig4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tame Temnothorax americanus
Pathway
tame03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
143899211 (Dnalig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tame03400
]
143899211 (Dnalig4)
Enzymes [BR:
tame01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
143899211 (Dnalig4)
DNA repair and recombination proteins [BR:
tame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
143899211 (Dnalig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143899211
NCBI-ProteinID:
XP_077265423
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MTTALEAKIKFKQLCDTLEGIAKAHEVKKKEKILQTFIDECRNIGDKLKVKYPESDVSLY
PILRLILPHLERQRGPHNLKQASLANLYAHVYGFARNSDSYKKLATYRECTPGDVVGTDF
ADRAYYVLDKKLPRIGNGFTIARINAFLDAISERNVTMQQKVETFRVLFRQITGFEMKWL
TRVVLKDLRLGIGMQRILHIYHPDANDKFLVTNDLREICNQLYDPKIKLKCGIRLFSHFK
PMLLERCNIENIGKLFRDNDLYYVQTKYDGERSQLHMKDGTFKYFTRRGYDITNNSGYGK
TGSSGFLTAVFTRCLNPTCHSFILDGELMAWHKEKRTFGTKGMNLDVKHLSASSRHQPCF
VAFDVILHNNVLLVDTPYKERLKLLNDIFTEEEGSLRVCRSTLISNREELIETFNTCLRN
NEEGLVVKKYNMKYKPNIRDGSGCYKIKAEYSDNLVQDIDLIILGGYYGEGKYTGIIKSF
MMGVAVPANNEGENPSQFLSIVSVSTGIKDETLRHLQTKLTPYWIKEHPENIMGPKICQL
YSLQGNQPDVWIHPEHSIILTIRATEMVRSNDYPTGYSLRFPRVVNVRTDKPWYSPCTTF
ELLSLVKDGGMIQKLTKREATVYDIDQIPVSKLRKTRQSRSKSIEHDMYNERVVPLTRLL
DRKEICVINGTDDVPKEQIEEILQQHSAKIVQNPMNTTFCVIVGTNRTIRAKEVINGKKY
DVVTLDWFKRVTTHADWASSDIFLPWELLCSRDSTREKVAENFDEYYDNFFVDANEESLK
RSLGKMTIFELADNQLTSEQEKEMDKDVFGGPSPYSLFRDIIGFFGNRSYYANYKFRFMS
GTVKDQIDNSVTHAFVEDISDETCTVVRNVTAREQTSIKIVKCKWIEECFQNGRICEITD
YLIDY
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgcgttagaagctaagattaaatttaaacaattatgcgatacattggaaggt
attgccaaggcacatgaggtaaaaaagaaagagaaaattttgcaaacgttcatcgacgaa
tgtcgaaatatcggcgacaaactgaaagtaaaatatcctgaatcggatgtatcgctctat
cccatattgagattgatcctaccccacctcgaacgacagcgtggaccgcataatttgaag
caagcttcgctggcaaatctttacgctcacgtatacggttttgcacgaaatagcgacagt
tataaaaagttggcaacgtaccgagaatgcacgccgggcgacgttgtaggaacggatttc
gctgaccgagcttattacgtattggataaaaagttacctcggattggtaatggattcacg
atcgcacggatcaacgcgttcctcgacgctatctctgagagaaacgtaacgatgcagcaa
aaagttgaaacgtttagagtactttttcgacaaattacgggattcgagatgaaatggctg
acgcgtgtcgtccttaaagatttacgacttggcataggaatgcaaagaatactgcacatc
tatcatcctgacgcgaatgataaatttcttgtaacgaatgacctgcgcgagatttgtaac
cagttatacgaccctaagatcaaattaaaatgcggcatacgattattttcgcactttaaa
ccgatgctcttggagagatgcaacatcgagaacatcggcaagttatttcgggacaatgac
ttgtactacgtacaaactaaatacgacggcgagaggtcgcaactccatatgaaggatgga
acgtttaaatatttcacgcgtagaggatacgacattacaaataattctggatacggaaaa
actggatcttcgggtttcttaaccgcggtatttacgcggtgtttgaatccgacgtgtcat
tcttttatattggatggagaattgatggcttggcataaagagaaaagaacatttggtaca
aaaggtatgaatctcgacgtcaaacatttgtcggcaagtagtcgtcatcagccgtgtttc
gtcgcgtttgacgtgattctccacaataacgtcttacttgttgatacaccttataaagag
agattaaaacttctcaacgatatattcactgaagaggaaggttctctacgtgtatgtcga
tctactttaatttcaaacagggaggaattgatagagacattcaatacatgccttcggaat
aacgaggaaggacttgttgtaaagaaatacaatatgaagtataaaccaaatatccgagat
ggcagcggttgttataaaattaaagcagagtattccgacaatttagtacaagatatagac
cttatcatacttggcggctattacggggagggcaaatatacaggaataattaaaagcttt
atgatgggcgttgccgttccagcgaacaacgaaggagaaaatccgtcgcaatttctctct
atcgtatccgtaagcactggaataaaagatgaaacgttgcgtcatcttcaaacaaaactt
acgccatattggatcaaggaacatcctgaaaatatcatgggccccaagatctgtcaatta
tattccttacagggaaatcagccagatgtatggattcatccagaacattccataatttta
acgatacgagcgaccgagatggtacgcagtaacgactatccaacagggtacagtttacga
tttcctagagttgtgaatgtgaggacagataagccatggtacagtccatgtactactttc
gaactcttatcgttggtcaaagatggaggaatgattcagaagttaaccaagcgggaagcc
actgtgtatgatatcgaccaaataccagtctctaaattacgaaagacaagacagagtcga
agtaaatcaattgaacatgacatgtacaacgagcgagtagtaccactcacgcgactatta
gacagaaaagaaatttgtgtaattaatggcaccgatgacgtaccgaaagagcagattgaa
gaaatactgcagcagcatagcgcaaaaattgttcagaatcccatgaatacaactttctgc
gtgatagtaggcacgaatagaacgatacgagcgaaggaagttataaacggtaaaaaatac
gatgttgtaactttggattggtttaaacgtgtcaccacgcacgccgactgggcttcgtca
gacatttttttaccgtgggaattgttatgcagtcgggacagtactagagagaaagttgca
gaaaattttgatgagtattacgacaatttttttgttgacgcaaacgaagaaagtttaaag
cgttcactcggcaagatgacgattttcgagcttgcagacaaccagttgaccagtgagcag
gaaaaagagatggacaaggacgtattcgggggtccatcgccttattctctgtttagagat
ataattggattctttgggaatcgatcgtattatgctaactataaattccgttttatgtca
ggtacagttaaagaccaaattgataattccgttacgcatgcgtttgtagaagacataagc
gatgagacatgcactgttgtaagaaacgtgacggcacgcgagcaaacatctataaaaatt
gtcaaatgtaaatggatcgaggaatgtttccaaaatggccgaatatgtgaaattacagat
tacctgattgattattaa
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