KEGG   Temnothorax americanus: 143901272
Entry
143901272         CDS       T11456                                 
Symbol
Roc1a
Name
(RefSeq) regulator of cullins 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tame  Temnothorax americanus
Pathway
tame03420  Nucleotide excision repair
tame04120  Ubiquitin mediated proteolysis
tame04141  Protein processing in endoplasmic reticulum
tame04310  Wnt signaling pathway
tame04341  Hedgehog signaling pathway - fly
tame04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tame00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    143901272 (Roc1a)
   04120 Ubiquitin mediated proteolysis
    143901272 (Roc1a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    143901272 (Roc1a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    143901272 (Roc1a)
   04341 Hedgehog signaling pathway - fly
    143901272 (Roc1a)
   04350 TGF-beta signaling pathway
    143901272 (Roc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tame04121]
    143901272 (Roc1a)
   03400 DNA repair and recombination proteins [BR:tame03400]
    143901272 (Roc1a)
Enzymes [BR:tame01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     143901272 (Roc1a)
Ubiquitin system [BR:tame04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   143901272 (Roc1a)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     143901272 (Roc1a)
   Cul2 complex
     143901272 (Roc1a)
   Cul3 complex
     143901272 (Roc1a)
   Cul4 complex
     143901272 (Roc1a)
   Cul7 complex
     143901272 (Roc1a)
   Cul8 complex
     143901272 (Roc1a)
   Cul9 complex
     143901272 (Roc1a)
DNA repair and recombination proteins [BR:tame03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      143901272 (Roc1a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      143901272 (Roc1a)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 143901272
NCBI-ProteinID: XP_077269544
LinkDB
Position
Unknown
AA seq 113 aa
MATTMEIDDDECDLPTSSTGKGEKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 342 nt   +upstreamnt  +downstreamnt
atggcgacgaccatggagatcgacgatgacgagtgcgatctgccgacctccagcaccggg
aaaggcgagaagaagcgtttcgaggtgaagaagtggaacgcggtggcactatgggcctgg
gatattgttgtggacaattgcgctatttgccgtaatcacatcatggacctctgtatcgag
tgccaggcgaaccaggcgtccgccacgagcgaggagtgcacggtagcttggggcgtatgc
aaccacgccttccattttcattgtatctcacgttggctgaaaacaagacaggtgtgtcca
cttgataatcgtgaatgggagtttcagaaatatggtcattaa

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