KEGG   Trichlorobacter ammonificans: GEAMG1_0551
Entry
GEAMG1_0551       CDS       T09459                                 
Name
(GenBank) DNA-(Apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
tamm  Trichlorobacter ammonificans
Pathway
tamm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tamm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GEAMG1_0551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tamm03400]
    GEAMG1_0551
Enzymes [BR:tamm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GEAMG1_0551
DNA repair and recombination proteins [BR:tamm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GEAMG1_0551
 Prokaryotic type
     GEAMG1_0551
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: CAH2030368
LinkDB
Position
GEAMG1:complement(605020..605676)
AA seq 218 aa
MKDQQIHEAMALLRQECRQWPTPSVTVVAQRHRSPFTVLISCIISLRTRDAVTAAASERL
FSRAVSPDALVRLTVDEIADLIYPAGFFRVKAGQIRDICCRLLEEYGGTVPDTVEELVRF
KGVGRKTANLVVTLGYGKPGICVDIHVHRITNRWGYVATATPDETEMALRRTLPPEYWIE
INDLLVSYGQHRCFPTVPACSGCPLALLCSRIGVTRSK
NT seq 657 nt   +upstreamnt  +downstreamnt
atgaaggatcagcagatacatgaagccatggccctgctccgacaggagtgccggcagtgg
ccgacgccgtcggtcaccgtggtggcgcagcgccaccgctccccgtttacggtgctcatc
tcctgtatcatctcgctgcgcacccgcgacgcggtgacggcagcggcatcggaacggctc
ttctcccgggccgtctccccggacgcactggtgcgcttgaccgtggacgagatcgccgac
ctgatctatccggccggcttcttccgggtcaaggccggccagatccgcgacatctgctgc
cggctgctggaagagtacggcggcacggtccccgataccgtcgaagaactggtccgcttc
aagggggtaggccgaaaaacggcaaacctggtggtgacgctgggatacggtaagccggga
atctgcgtcgatatccatgtgcaccgcatcaccaaccgctggggctacgtcgccaccgca
acccccgatgaaaccgaaatggcgctgcgccgcacattgccgccggagtactggatcgag
atcaatgacctgctggtcagttacggccaacaccgctgcttccccacggtgccggcatgc
tccggctgcccgctggctctgctgtgcagccggatcggggtcacccgcagcaagtga

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