Trichlorobacter ammonificans: GEAMG1_2856
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Entry
GEAMG1_2856 CDS
T09459
Symbol
ymdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K09769
2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:
3.1.4.16
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm00230
Purine metabolism
tamm00240
Pyrimidine metabolism
tamm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
GEAMG1_2856 (ymdB)
00240 Pyrimidine metabolism
GEAMG1_2856 (ymdB)
Enzymes [BR:
tamm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
GEAMG1_2856 (ymdB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YmdB
Metallophos
Motif
Other DBs
NCBI-ProteinID:
CAH2032692
UniProt:
A0ABN8HJ03
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All DBs
Position
GEAMG1:3034424..3035212
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AA seq
262 aa
AA seq
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MSVRILFIGDIVGSPGRSAISRELHRLVDRHAVDLVIANGENAAGGFGITPDTAEELFRQ
GICLLTSGNHIWDKKDTSGFLDREERIIRPLNYPPGTPGRGAALVETPGGITVGVLNLEG
RVYMKNLDCPFRTADAELARLKKITPIVLVDIHAEATSEKSALGWYLDGRVSAVVGTHTH
VQTADERILPGGTAYLTDVGMTGSFDSVIGIDKHQAIQRFLTQQPVKFDVPKKDLRINAV
VIGVETATGKAVSIERINVPVG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccgtattctcttcataggcgatatcgtcggcagccccggccgcagcgccatc
agccgggaactgcaccggctggtggaccgccacgccgttgatctggtgatcgccaacggc
gaaaatgccgccggcggcttcggcatcaccccggacacggcggaggagctgttccgccag
gggatttgtctgctgaccagcggtaaccatatctgggacaagaaagacaccagtggcttc
ctggaccgggaagaacggatcatccgcccccttaactacccccccggcacgccgggacgg
ggggccgccctggtggaaacccccggcggcatcacggtgggggtactgaacctggagggg
cgggtttacatgaaaaatctggactgccccttccggaccgccgatgcggaactggcacgg
ctgaaaaagataacccccatcgtgctggtggatatccatgccgaggccacttcggaaaag
agcgccctgggctggtacctggacggccgggtctcggcggtggtgggaacccacacccat
gtccagaccgccgacgagcggattctccccggcggcaccgcctacctgaccgacgtgggg
atgaccggttccttcgattcggtgatcggtatcgacaaacatcaggcgatccagcggttt
ctgacccaacagccggtcaagttcgacgtccccaagaaagacctgcggatcaacgccgtg
gtgatcggggtggaaactgccaccggcaaagcggtcagtattgaacggatcaatgtcccc
gtaggatag
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