Typha angustifolia (narrow-leaf cattail): 140762907
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Entry
140762907 CDS
T11061
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140762907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140762907
Transcription factors [BR:
tang03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
140762907
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
140762907
NCBI-ProteinID:
XP_072956986
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All DBs
Position
7:join(3482338..3482363,3482479..3483343,3483476..3483574,3483658..3483723,3484031..3484096,3484188..3484487,3484566..3484692,3485121..3485125)
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AA seq
517 aa
AA seq
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MSNQKKTIGPESELIELLWRDGHVVMQSQTHRKSLSAINDFRQAQKPESVVLKSGVTQGN
TRDLTQEDETVSWFQYPFDDSLEKDIFSEFFFEMPAVEAAGTDKMMKDVPVQDDRCSKFG
KTIEGVSPSASQQSNLFQEKVMPPPKSHVIGSIQDPPSLQNNCFINFPQFSRPERAHLGS
SNKKLEEKRLANKIPVGVGESSTMTVVSSICGSNQVQIQAGPSNTSSDGTGVVGTKLKED
LQPKLFSGKEQRVTHEATVTSSGGSGCSFGRTRQQSTNTQSNKRKGRDTEESESQSEEAE
YESVDAKKPPQRSASARRSRAAEVHNLSERRRRDRINEKMKALQDLIPHCNKTDKASMLD
EAIEYLKTLQLQVQIMWMGSGMAPMMFPGVHQYMSRMGMRMSPASMASVHSPVQLPRVPL
VNQTMASTSTANQAPLCPSPHFNPASFPALMHNVNIPESYAHYLGLNHMQLPSQAMNFYT
YGTQMVPQNQTLVAPNCSLPPAAGAFPAESIQNNRTG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcaaaagaaaactattggaccagagagtgaacttatagaacttttatggcgc
gacgggcatgtcgttatgcaaagccagactcatcggaaatccctgtctgcgattaacgac
ttcagacaagctcagaaacctgagtcagtagtactaaaatcaggagtgactcaagggaat
acaagagacttgacgcaagaagatgagactgtgtcatggttccagtacccatttgatgat
tcattagaaaaggatatcttctccgagttcttctttgaaatgccagctgtggaagccgct
gggactgataagatgatgaaggatgtcccagtacaagatgacagatgttcaaagtttggt
aaaaccattgaaggtgtctctccctctgcttcgcagcagtcaaatttattccaagaaaaa
gtgatgcctcctcctaagtcacacgttatcggttctatccaagatcctccaagtttacag
aataattgttttattaattttcctcagttctcaaggccagaaagagctcatttgggatcc
tctaataagaaattagaggaaaaaagattggcaaataaaatcccggtaggagtaggagag
tcttcaacaatgacagttgtttcaagtatttgtggaagcaaccaagttcagatacaggcc
ggtccaagcaatacgagcagtgatggaacaggtgttgttggaacaaagttgaaagaggat
ctacagcctaagttgttctctggaaaggaacagagagttactcatgaagctactgttact
tcatcaggtgggtctggttgtagttttggaagaacaagacagcagagcacaaacactcag
agcaacaaaagaaaaggaagagatacagaagaatctgaaagccagagtgaggaagctgag
tatgagtctgtcgatgcgaagaagccacctcaacgatctgcttctgctcgcagaagccgt
gcggccgaagtccataacctctcagagaggagaagaagggacagaattaacgagaagatg
aaagcactgcaagaccttatacctcattgcaacaagactgacaaggcgtcgatgttagat
gaggcaattgagtacttgaagacacttcaactacaagttcagataatgtggatgggtagt
ggcatggcaccgatgatgtttcctggtgtccatcagtacatgtcacgcatgggcatgcgg
atgagtcctgcttctatggcttcagtacatagtccagttcaactgccaagagttccattg
gtcaatcaaactatggcttcaacttctactgcaaaccaagcaccattgtgcccatcacca
cactttaatccagcaagttttccagctcttatgcacaatgttaatattcccgaatcatat
gctcactaccttggtctcaatcacatgcagctaccgtctcaggcaatgaacttctataca
tatggaactcaaatggtgccgcagaatcagacattagtagcaccaaactgcagtctcccc
cctgctgctggagcatttcctgccgaaagtatccaaaacaatagaactggttaa
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