Typha angustifolia (narrow-leaf cattail): 140763596
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Entry
140763596 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140763596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140763596
03041 Spliceosome [BR:
tang03041
]
140763596
03032 DNA replication proteins [BR:
tang03032
]
140763596
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
140763596
Spliceosome [BR:
tang03041
]
Complex A
U1 snRNP components
Sm proteins
140763596
U2 snRNP components
140763596
Complex B
U1 snRNP components
140763596
U4/U6.U5 tri-snRNP components
140763596
Complex C
U2 snRNP components
140763596
DNA replication proteins [BR:
tang03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
140763596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
140763596
NCBI-ProteinID:
XP_072957964
LinkDB
All DBs
Position
7:3195263..3196078
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AA seq
271 aa
AA seq
DB search
MSMSKGSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGSKNP
GEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKAHGAASLAGPGVGRAAGRGIPTA
PLVQAQPGLSGPVRGVGGPAPGMMQPQISRPPVPQLSAAPVSYPQVVRPPPPGQMQGFPG
QGPPMGRGPPPMQMHFAPRPGQPPFPMPPPQFGQRPMGPPPQMMRGPPPPAPRPGMPPPP
GGQVPVFAPPRPGMPPPPPPNMQQQGQNQQQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagggctccaagatgctccaatacataaactaccgcatgcgcgtcacg
atccaggacgggaggcagctcgtaggcaagttcatggcgttcgatcgccacatgaacctc
gtcctcggcgactgcgaggagttccgcaagcttcctcccgttaagggctccaagaacccc
ggcgaggagcgtgaggaccgcagaacgctaggactcgtactcctccgcggtgaggaggtc
gtctccatgacggttgagggcccgcctccccccgacgagtcccgcgccaaggcacacggc
gccgcctcactagccggccccggggtcggccgcgccgcaggccggggaatccccaccgcg
ccgctcgtccaagcccagcctggcctttctggtccagttcggggagttggtggtcctgcc
cctggcatgatgcagccacagatctcgaggccgcctgtcccccagctgtccgccgcaccc
gtctcatacccacaagtcgtccgcccgccgccacctggacaaatgcaggggttccctgga
caggggcctccgatggggagggggccaccaccgatgcagatgcattttgctccaaggccg
gggcaaccgccattccctatgccacctccgcagtttgggcagcggccgatggggccacct
ccgcagatgatgagggggccaccaccaccagctccgaggccagggatgccgcctccgcct
gggggtcaggtgccggtgttcgcacctccgaggcccgggatgccgcctccgccaccaccg
aatatgcagcagcagggacagaaccagcagcagtag
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integrated database retrieval system
