KEGG   Typha angustifolia (narrow-leaf cattail): 140768233
Entry
140768233         CDS       T11061                                 
Name
(RefSeq) RING-box protein 1A-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03420  Nucleotide excision repair
tang04120  Ubiquitin mediated proteolysis
tang04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140768233
   04120 Ubiquitin mediated proteolysis
    140768233
  09124 Replication and repair
   03420 Nucleotide excision repair
    140768233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140768233
   03400 DNA repair and recombination proteins [BR:tang03400]
    140768233
Enzymes [BR:tang01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     140768233
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   140768233
  Multi subunit type E3
   SCF complex
    Ring finger protein
     140768233
   Cul2 complex
     140768233
   Cul3 complex
     140768233
   Cul4 complex
     140768233
   Cul7 complex
     140768233
   Cul8 complex
     140768233
   Cul9 complex
     140768233
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      140768233
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      140768233
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 140768233
NCBI-ProteinID: XP_072964536
LinkDB
Position
10:join(234114..234249,234405..234455,234573..234632,239023..239094,239186..239223)
AA seq 118 aa
MAAMETDLNVVPSGEGSSAAGLSSSAKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcggcgatggagactgacctcaacgtagtcccctccggcgagggatcgagcgccgcc
ggcctgtcgtcgtcggccaagaaaccgaagcgattcgagatcaagaagtggaacgccgtc
gccctctgggcctgggatatcgtcgtggacaactgcgccatatgcaggaatcacatcatg
gatctatgtatcgagtgccaggctaatcaagcgagtgcaacgagcgaggagtgcacggta
gcttggggtgtttgcaatcatgcgttccacttccactgcattagtcggtggctgaagaca
cgacaagtgtgccctttggacaatagcgagtgggagttccaaaagtacggtcattaa

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