KEGG   Typha angustifolia (narrow-leaf cattail): 140769192
Entry
140769192         CDS       T11061                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-A1-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03008  Ribosome biogenesis in eukaryotes
tang03013  Nucleocytoplasmic transport
tang03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140769192
   03008 Ribosome biogenesis in eukaryotes
    140769192
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    140769192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140769192
   03009 Ribosome biogenesis [BR:tang03009]
    140769192
   03016 Transfer RNA biogenesis [BR:tang03016]
    140769192
   03036 Chromosome and associated proteins [BR:tang03036]
    140769192
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140769192
   04031 GTP-binding proteins [BR:tang04031]
    140769192
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     140769192
Ribosome biogenesis [BR:tang03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    140769192
  Pre-60S particles
    140769192
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    140769192
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     140769192
   Spindle formation proteins
    140769192
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140769192
GTP-binding proteins [BR:tang04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    140769192
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 Septin ArgoMid AAA_7 AAA_22 AAA_16
Other DBs
NCBI-GeneID: 140769192
NCBI-ProteinID: XP_072965913
LinkDB
Position
10:join(12962110..12962112,12962225..12962294,12962459..12962515,12962596..12962713,12964701..12964790,12964882..12965061,12965151..12965228,12965763..12965832)
AA seq 221 aa
MALPNQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFHTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKMVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDTNLHFV
ESPALAPPEVQIDLAAQQQYEAEIAAAAAQPLPDDDDEAFD
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctcttccaaaccagcaggcggtggattaccctagttttaagctcgtgatcgttgga
gatggaggaacaggaaagacgacattcgtcaagagacatctcacaggagagtttgagaaa
aaatacgaacctactattggtgtcgaagtgcatccgttggatttccacactaactgtggg
aaaatccgcttctactgctgggatactgctgggcaggagaagtttggtgggcttcgcgac
ggatactatatccatggacaatgtgccattatcatgtttgatgttactgcaaggcttaca
tacaaaaatgttcctacatggcacagggatttatgcagagtttgtgagaatattcccatt
gttctttgtggaaacaaagttgatgtgaagaacaggcaggtaaaagcaaagatggtcaca
tttcacaggaagaagaatcttcagtattatgaaatttctgcaaagagcaactacaacttt
gagaagccatttctctatttagccagaaagcttgcaggggacacaaatcttcactttgtt
gaatcaccagctcttgctcctcctgaggttcaaattgatcttgctgcgcaacaacaatat
gaagctgagatagctgctgctgcagcgcagcctcttccagacgatgatgatgaggcattt
gattga

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