KEGG   Typha angustifolia (narrow-leaf cattail): 140770018
Entry
140770018         CDS       T11061                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03008  Ribosome biogenesis in eukaryotes
tang03013  Nucleocytoplasmic transport
tang03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140770018
   03008 Ribosome biogenesis in eukaryotes
    140770018
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    140770018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140770018
   03009 Ribosome biogenesis [BR:tang03009]
    140770018
   03016 Transfer RNA biogenesis [BR:tang03016]
    140770018
   03036 Chromosome and associated proteins [BR:tang03036]
    140770018
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140770018
   04031 GTP-binding proteins [BR:tang04031]
    140770018
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     140770018
Ribosome biogenesis [BR:tang03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    140770018
  Pre-60S particles
    140770018
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    140770018
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     140770018
   Spindle formation proteins
    140770018
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140770018
GTP-binding proteins [BR:tang04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    140770018
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid AAA_16 Septin AAA_7 AAA_22
Other DBs
NCBI-GeneID: 140770018
NCBI-ProteinID: XP_072967070
LinkDB
Position
11:complement(join(1768820..1768889,1769117..1769194,1769285..1769464,1769551..1769640,1771023..1771140,1771237..1771293,1771466..1771535,1771641..1771643))
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDSSLHFV
ESPALAPPEVQIDLAAQQQHEADLAAAAAQPLPDDEDDIFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctttgccgaaccagcagacggtcgattacccgagcttcaagctcgtgatagttggt
gatggaggaacaggtaaaacgaccttcgtcaagaggcatctcaccggcgagttcgagaag
aagtatgagcctaccatcggtgtggaagttcatccgttagatttcttcaccaattgtggg
aagatcagattttactgctgggatacagccggtcaggaaaagtttggtggtcttagggat
ggatactacatccatggccagtgtgctattatcatgtttgacgtaacttcccgattaaca
tacaagaatgttccaacatggcatcgggacttgtgcagagtttgtgaaaatatccctatt
gtgctttgcggcaacaaggtcgatgtgaagaacaggcaggtcaaagcaaagcaggttaca
ttccataggaagaagaatctacagtactatgagatttcggcaaagagcaattacaacttc
gaaaagcccttcctgtatcttgctaggaaacttgcaggggattcaagccttcactttgtt
gaatctcccgctcttgctcctccagaggttcagatcgacttggctgcacagcagcagcat
gaagccgaccttgcagcagccgcagctcaacctcttcctgatgatgaggatgatatattt
gagtag

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