Typha angustifolia (narrow-leaf cattail): 140770308
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Entry
140770308 CDS
T11061
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140770308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140770308
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140770308
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140770308
NCBI-ProteinID:
XP_072967541
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Position
11:complement(join(13155071..13155358,13155439..13155525,13156252..13156388,13156790..13156841,13156996..13157156,13158054..13158195))
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AA seq
288 aa
AA seq
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MVEGWKTTGIEVSGLHFAYDGQPPLFAKFSLEIAPGSRCLLVGANGSGKTTLLKILAGKH
MVGGRDVVRVLNGSAFHDTQLVCNGDLAYLGGSWSRTIGSAGDVPLQGDFSAEHMIFGVE
GIDPVRREKLIDLLDIDLNWRMHKVSDGQRRRVQICMGLLHLYKVLLLDEITVDLDVVTR
MDLLEFFKEECEERGATIVYATHIFDGLETWATDVAYIQDGELKRSAKLSDVHELKSANN
LLSVVESWLRSETKLPRKESVPSSIKSTGTSPFGSSPFRSSRHMAYYR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggtggagggatggaagacgacggggatcgaggtgtcgggcctccacttcgcgtacgac
gggcaaccgccgctgttcgcgaagttcagcctcgaaatagctccgggctctcggtgcctc
ctcgtcggcgccaatggatccggcaagaccacgttgctaaagattctagctgggaaacac
atggtcggaggaagagatgttgtgcgagttcttaatggctctgcttttcatgacacacaa
cttgtctgtaatggtgaccttgcctacctaggaggttcttggagtagaaccattggttct
gctggagatgttcctctgcaaggtgacttctctgcagagcacatgattttcggagttgaa
gggatcgatccagttaggagagaaaagctgattgatctgcttgatatcgatctgaactgg
cgtatgcataaagtttctgatgggcagcgtcgtcgtgtccaaatttgcatgggtcttctt
catctgtacaaggttctattgcttgacgaaattacagtagatctagatgttgtcacaaga
atggatctgcttgagttcttcaaggaagaatgtgaagagagaggagctaccatagtgtat
gccactcatatatttgacggattggagacatgggccactgatgtggcttatatccaagat
ggtgagttgaaaaggtctgcaaaactgtccgacgtacacgagctaaaaagtgccaacaac
ctgctctcagtcgtcgagtcatggctccgatctgagaccaaacttccaagaaaagagtca
gttccctcttccatcaaatccactggtacctccccatttggctcatctccatttagatca
tcccgacatatggcctactatcgttga
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