KEGG   Typha angustifolia (narrow-leaf cattail): 140776516
Entry
140776516         CDS       T11061                                 
Name
(RefSeq) ABC transporter I family member 20
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140776516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140776516
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     140776516
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_23 Arf AAA_15 AAA_25 AAA nSTAND3 ORC-CDC6-like AAA_28 AAA_7 AAA_24
Other DBs
NCBI-GeneID: 140776516
NCBI-ProteinID: XP_072976347
LinkDB
Position
14:join(2167050..2167221,2167301..2167434,2168033..2168152,2168314..2168409,2168523..2168675,2168758..2168835,2170625..2170864)
AA seq 330 aa
MADESNEAPVVVEVNNLSFTYPGIDGHAPPGSKPLIDGLSLSLRAGNRCLLVGANGAGKT
TILKILGGKHMVDPAMVRILGRSAFHDTNLTSSGDLSYLGGEWRRDVAFAGFQVAIQIDV
SAEKMIYGVSGIDPQRRDELIKILDIDLSWRLHKASDGQRRRVQICMGLLKPFKVLLLDE
ITVDLDVLARANLLKYLRKECEERGAVIIYATHIFDGLDDWPSHIVYVADGKLQLALPLG
KVKETSNLSLMRTVESWLRKEKDDNKKRRQERKANGLLEHEKPIEGSRVIGDPARSAARV
LNNGWAAGRLHSTLAGEENFLLSSNRVLRQ
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcggacgaatccaacgaagctcccgtagtagtcgaagtgaacaacctttccttcacg
tatccggggatcgacggccacgcgccgccgggatcgaagcctctcattgatggcttatct
ctctccctccgcgctggcaaccgttgcctccttgtcggagccaatggcgccgggaaaacg
acgatactgaagattttgggagggaaacacatggtggatccggccatggtccgaatcttg
gggaggtcggcgtttcatgatactaatctcacttcttccggtgatctttcctacttgggc
ggagagtggaggagggatgttgcatttgctggttttcaggtagctatacagatagatgtt
tctgcagagaagatgatatatggagtttcaggcatcgatcctcaaaggagggatgaactt
attaagatattagatattgatctttcatggcgattgcacaaagcatcagatggtcaaaga
aggcgagttcaaatttgtatgggccttctaaagccatttaaggttcttcttcttgatgag
attacagttgacctagatgtgctggcaagggccaatcttttgaaatatctaaggaaagaa
tgtgaagaacgaggtgcagtgatcatttatgcaacacatatttttgatggtcttgatgat
tggccgtcgcatattgtatacgtcgcagacgggaagttgcaactggcattgcctttggga
aaagtgaaagaaacgagtaacttatctctcatgagaacagtggagagctggttgcgaaaa
gagaaggatgacaataagaagagaagacaggagaggaaggcgaacggtctattggaacat
gagaagccaatcgagggaagtcgagtaataggagaccctgccagaagtgcagctcgagta
ttgaataatggttgggcagctgggagattacattcaacactagcaggggaggagaatttc
cttctcagttctaacagggttcttaggcaataa

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