KEGG   Typha angustifolia (narrow-leaf cattail): 140779625
Entry
140779625         CDS       T11061                                 
Name
(RefSeq) RING-box protein 1A-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03420  Nucleotide excision repair
tang04120  Ubiquitin mediated proteolysis
tang04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140779625
   04120 Ubiquitin mediated proteolysis
    140779625
  09124 Replication and repair
   03420 Nucleotide excision repair
    140779625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140779625
   03400 DNA repair and recombination proteins [BR:tang03400]
    140779625
Enzymes [BR:tang01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     140779625
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   140779625
  Multi subunit type E3
   SCF complex
    Ring finger protein
     140779625
   Cul2 complex
     140779625
   Cul3 complex
     140779625
   Cul4 complex
     140779625
   Cul7 complex
     140779625
   Cul8 complex
     140779625
   Cul9 complex
     140779625
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      140779625
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      140779625
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 140779625
NCBI-ProteinID: XP_072980890
LinkDB
Position
15:join(14164675..14164819,14164932..14164982,14165074..14165133,14168456..14168527,14168635..14168672)
AA seq 121 aa
MAAMETDINMTPAGEGSSSAAAAGPSLSVKKPKRFEIKKWNAVSLWAWDIVVDNCAICRN
HIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG
H
NT seq 366 nt   +upstreamnt  +downstreamnt
atggcggccatggagaccgacatcaacatgactcccgccggcgagggatcgagctctgcc
gccgccgccggaccgtccttgtccgtcaagaagccgaagcgattcgagatcaagaagtgg
aacgccgtctccctctgggcctgggatatcgttgtcgacaactgcgccatctgccgtaac
cacatcatggatctctgcattgaatgccaggctaatcaagcaagtgcgaccagcgaagag
tgtacagtagcttggggtgtttgcaatcatgccttccatttccactgcattagtcggtgg
cttaagactcgtcaagtgtgccctctggacaacagtgagtgggagttccagaaatatgga
cactag

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