Thermus aquaticus: TO73_1739
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Entry
TO73_1739 CDS
T04117
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
taq
Thermus aquaticus
Pathway
taq03030
DNA replication
taq03410
Base excision repair
taq03420
Nucleotide excision repair
taq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TO73_1739
03410 Base excision repair
TO73_1739
03420 Nucleotide excision repair
TO73_1739
03430 Mismatch repair
TO73_1739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taq03032
]
TO73_1739
03400 DNA repair and recombination proteins [BR:
taq03400
]
TO73_1739
Enzymes [BR:
taq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
TO73_1739
DNA replication proteins [BR:
taq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TO73_1739
DNA repair and recombination proteins [BR:
taq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
TO73_1739
NER (nucleotide excision repair)
GGR (global genome repair) factors
TO73_1739
MMR (mismatch excision repair)
DNA ligase
TO73_1739
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TO73_1739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
HHH
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ALJ91571
LinkDB
All DBs
Position
complement(1579019..1581043)
Genome browser
AA seq
674 aa
AA seq
DB search
MTLEAARRRVNELRDLIRYHNYLYYVLDAPEISDAEYDRLLRELKELEERFPELQSPDSP
TEQVGARPLESTFRPVRHPTRMYSLDNAFSLDEVRAFEERIERALGRKGPFLYTVEHKVD
GLSVNLYYEEGILVFGATRGDGETGEEVTQNLLTIRTIPRRLTGVPDRLEVRGEVYMPIE
AFLRLNQELEEAGERIFKNPRNAAAGSLRQKDPRVTARRGLRATFYALGLGLEETGLKSQ
HDLLLWLRERGFPVEHGFTRALGAEGVEEVYQAWLKERRKLPFEADGVVVKLDDLALWRE
LGYTARAPRFALAYKFPAEEKETRLLSVAFQVGRTGRITPVGVLEPVFIEGSEVSRVTLH
NESFIEELDVRIGDWVLVHKAGGVIPEVLRVLKERRTGEEKPILWPENCPECGHALIKEG
KVHRCPNPLCPAKRFEAIRHYASRKAMDIQGLGEKLIEKLLEKGLVRDVADLYRLKKEDL
VNLERMGEKSAENLLRQIEESKGRGLERLLYALGLPGVGEVLARNLALRFGHMDRLLEAG
LEDLLEVEGVGELTARAILNTLKDPEFRDLVRRLKEAGVEMEAKEREGEALKGLTFVITG
ELSRPREEVKALLRRLGAKVTDSVSRKTGFLVVGENPGSKLEKARALGVPTLSEEELYRL
IEERTGKDPRALTA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcgaggcggcccgcaggcgcgtcaacgaactcagggacctgatccgttaccac
aactacctctactacgtcctggacgcccccgagatctccgacgccgagtacgaccggctc
cttagggagcttaaggagctggaggagcgttttcccgagctccaaagccccgactccccc
acggaacaggtgggggcgaggcctctggagtccaccttccgcccggtgcgccaccccacc
cgcatgtactccctggacaacgccttttccttggacgaggtgagggcttttgaggagcgg
atagagcgggccctggggcggaaggggcccttcctctacaccgtggagcacaaggtggac
ggtctttccgtgaacctctactacgaggagggcatcctcgtctttggggccacccggggc
gacggggagaccggggaggaggtgacccagaacctcctcaccatccgcaccattccccgc
cgcctcacgggcgttccggaccgcctcgaggtccggggcgaggtctacatgcccatagag
gccttcctcaggctcaaccaggagctggaggaggcgggggagcgcatcttcaaaaacccc
aggaacgccgccgccgggtccttgcggcagaaagaccccagggtcacggccaggcggggc
ctgagggccaccttttacgccctggggctgggcctggaggaaaccgggttaaaaagccag
cacgaccttctcctatggctaagagagcggggctttcccgtggagcacggcttcacccgg
gccctgggggcggagggggtggaggaggtctaccaggcctggctcaaggagaggcggaag
cttccctttgaggccgacggggtggtggtcaagctggacgacctcgccctctggcgggag
ctgggctacaccgcccgcgccccccgcttcgccctcgcctacaagttcccggccgaggag
aaggagacccgcctcctctccgtggccttccaggtggggcggaccgggcgcatcaccccc
gtgggcgttttggagcccgtcttcatagagggcagcgaggtgagccgggtcaccctccac
aacgagagcttcattgaggagctggacgtgcgcatcggcgactgggttctggtccacaag
gcgggcggggtgattcccgaggtgctgagggtcctgaaagagcgccgcaccggggaggag
aagcccatcctctggcccgagaactgccccgagtgcggccacgccctcatcaaggagggg
aaggtccaccgctgccccaaccccctctgccccgccaagcgctttgaggccatccgccac
tacgcctcccgcaaggccatggacatccagggcctgggggagaagctcatagaaaagctt
ctggaaaagggcctggtccgggacgtggctgacctctatcgcctgaagaaggaggacctg
gtgaacctggagcgcatgggggagaagagcgccgagaacctcctccgccagatagaggag
agcaagggccgcggcctggagcgcctcctctacgccctgggccttcccggggtgggggag
gtgctggcccggaacctggccctccgcttcggccacatggaccgccttctggaggcgggc
ctcgaggacctcctggaggtggagggggtgggcgagctcaccgcccgggccatcctgaat
accctaaaggacccggagttccgggacctggtgcgccgcctgaaggaggccggggtggag
atggaggccaaagagcgggagggcgaggccttgaaggggctcaccttcgtcatcaccggg
gagctttcccggccccgggaggaggtgaaggccctccttaggcggcttggggccaaggtg
acggactcggtgagccgcaagacgggcttcctggtggtgggggagaacccggggagcaag
ctggaaaaggcccgcgccttgggggtccccaccctgagcgaggaggagctctaccgcctc
attgaggagaggacgggcaaggacccaagggccctcacggcctag
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