Tardiphaga sp. vice154: FIU28_01670
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Entry
FIU28_01670 CDS
T11090
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU28_01670 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tarv03400
]
FIU28_01670 (nth)
Enzymes [BR:
tarv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIU28_01670 (nth)
DNA repair and recombination proteins [BR:
tarv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU28_01670 (nth)
Prokaryotic type
FIU28_01670 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF7024
HBM
Motif
Other DBs
NCBI-ProteinID:
QDM20001
LinkDB
All DBs
Position
371381..372112
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AA seq
243 aa
AA seq
DB search
MAKIIRKLPAKSAGKSLPKPAPAKKPKKLKPWSAAEVHEAFSRFQEANPEPKGELEHVNP
FTLLVAVVLSAQATDAGVNRATRALFAIADTPQKMLELGEEEVRNYIRTIGLYRTKAKNV
IALSAKLIAEFGGVVPRTRAELESLPGAGRKTANVVLNMAFGEHTMAVDTHVFRVGNRTN
LAPGKNVLDVELALMRVIPDEFMMHAHHWLILHGRYTCLARKPRCELCLINDLCRWPEKT
VQA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcatccgcaagctgccggcgaagtctgccggcaaatcgctgccgaaacca
gcaccggccaaaaagcccaaaaagctgaagccctggtcggccgcagaggtacatgaggca
ttctcccggttccaggaggccaatccggagccgaagggcgagctggagcacgtcaacccg
ttcacgctgctggttgccgtggtgctgtcggcgcaggccaccgacgccggcgtcaacaga
gcgacgcgcgcgctgttcgccatcgccgacacgccgcagaagatgctggagctcggcgag
gaggaggtccgcaactacatcaggacgatcggcctgtaccgcactaaggcaaagaacgtc
atcgcgctgtcggcaaagctgatcgccgaattcggcggcgtggtgccgcgcacgcgtgcc
gagctggagtctctgccgggcgccgggcggaagaccgccaacgtcgtgctcaacatggcg
ttcggcgagcatacgatggcggtggatacgcatgtgtttcgcgtcggcaatcgcaccaat
ttggcgccgggcaagaacgtgctggacgtcgagctcgcgctgatgcgcgtgattcccgac
gagttcatgatgcacgcgcatcattggctgattctgcacgggcgctacacttgcctggcg
cgcaagccgcgctgcgaattgtgcctgatcaacgatctgtgccgctggccggagaagacg
gtgcaggcgtga
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