Tardiphaga sp. vice154: FIU28_09335
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Entry
FIU28_09335 CDS
T11090
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv00300
Lysine biosynthesis
tarv00550
Peptidoglycan biosynthesis
tarv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FIU28_09335
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FIU28_09335
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tarv01011
]
FIU28_09335
Enzymes [BR:
tarv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FIU28_09335
Peptidoglycan biosynthesis and degradation proteins [BR:
tarv01011
]
Precursor biosynthesis
Amino acid ligase
FIU28_09335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QDM21304
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Position
1994316..1995770
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AA seq
484 aa
AA seq
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MKLRDLFSDDGAIDGPAGDIDVSGLAVDSRAVKPGDLFFALAGSKTDGARFVTQAIAAGA
VAVAGDHMPIGLPVPYVVTPNPRLALARAAAKFHPRQPAVIAAVTGTSGKTSVASFVREI
WGRLGHQAASIGTIGLVSPKRTVYGSLTTPDPISLHRELDEITGEGVTHLALEASSHGLD
QFRLDGVRIQAGGFTNLSRDHMDYHPDIAHYLGAKLRLFLNLVVDDGVAVVAADHEHSAQ
VIHAAQSRHLNLITVGRRGGAGEGIRLVDAAIDGFAQKLTLEHRGKTFDIKLPLVGEFQI
ENALVAAGLVIGTGSDTDAVFAALEHLEGARGRLERVGDHHGAPVFVDYAHKPDALAKAL
QALRPYAKRRLVVVFGAGGDRDTGKRPLMGEIAAANADHVIVTDDNPRSEDPARIRAAIM
ATASGAIEIGDRAEAIRAAIAGLQEGDALLIAGKGHETGQIVGDRVLPFSDHEAAGAALN
SGVS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgcgatcttttcagcgatgatggcgcgatcgatgggcctgcaggcgacatc
gacgtcagcgggctcgccgtcgatagccgtgccgtcaaacccggcgacctgttctttgcg
ctggccggcagcaagaccgatggtgcgcgtttcgtcacccaggcgattgccgccggcgcc
gttgcagtggccggtgaccacatgccgatcggcctgccggtgccctatgtcgtcactccc
aatccgcgcctcgcgctggcgcgggcagccgccaaattccatccgcgccagccggcggtg
atcgccgccgtcaccggcacctccggcaaaacctcggtggcgtccttcgtgcgcgagatc
tggggccggctcggtcatcaggccgccagcatcggcaccatcggtctggtgtcgccgaag
cgcaccgtctacggctcgctgaccacgccggatcccatttccctgcaccgcgaactcgac
gagatcaccggcgagggtgtcacccatctcgcgctggaggcctcgtcgcacgggcttgac
cagtttcgcctcgacggcgtccgcatccaggccggcggcttcaccaatctgtcgcgcgac
cacatggactaccatccggacatcgcgcactatctcggcgccaagctgcggctgtttctg
aatctcgtcgtcgatgatggcgtcgccgtggtcgcggccgatcacgaacattccgcgcag
gtgatccatgccgcgcaatcgcgccatctcaacctcatcacggtcgggcgccggggtggg
gcgggcgaaggcatccggctggttgacgcggcgatcgatggctttgcgcaaaaactaacg
ctggagcatcgcggcaagaccttcgatatcaaactgccgctggtcggcgaattccagatc
gagaacgcgctggtcgcggccggtctggtgatcggcaccgggagcgatacggacgcggtc
ttcgccgcgctcgaacatctcgagggcgcccggggccggctggagcgcgtcggcgaccat
catggcgcgccggtgttcgtcgattacgcgcataagccggacgcgctcgccaaggcgctg
caggcgctgcggccctatgccaagcgcaggctggtcgtggtgttcggcgccggcggcgac
cgcgacaccggcaagcggccgctgatgggcgagatcgcggcggccaatgccgaccatgtc
atcgtcaccgacgacaatccgcgctctgaggaccccgccaggatccgggcggccatcatg
gccaccgccagcggcgcgatcgaaatcggcgaccgcgccgaggcgatccgcgcggcgatc
gcaggcctgcaagagggcgacgcactgctgatcgccggcaagggacacgagactggacag
atcgttggcgaccgcgtgttgccgttcagtgatcacgaggcggcaggggccgcgctgaat
tcgggggtgtcatga
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