Tardiphaga sp. vice154: FIU28_10090
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Entry
FIU28_10090 CDS
T11090
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv00909
Sesquiterpenoid and triterpenoid biosynthesis
tarv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
FIU28_10090 (shc)
Enzymes [BR:
tarv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
FIU28_10090 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
FIU28_10090 (shc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Pec_lyase
Motif
Other DBs
NCBI-ProteinID:
QDM24413
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Position
2165764..2167725
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AA seq
653 aa
AA seq
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MQSDHAEATVSNAALESSIDAARQGLLGFRQPDGHWVFELEADVTIPSEYALLRHYLAEP
VDHELERKIGNYIRRTQGTHGGWALVQDGPFDMSASVKAYFALKMMGVDPNEPYMAKARE
AIRSRGGAIHSNVFTRFMLSMFGVLTWKSVPVLPVEIMFLPFWFPFHLNKMSYWARATIV
PLMVLTAKKPRAQNLGEIDIRELFLQDPKLIGRTARAPHQSRALFAFFTGIDMLLRAAEP
FFPKKLRQRAIDKAVAFVEERLNGEDGLGAIYPPMANTVMMYEVLGFPADHPPRATTRRG
IDKLLVIGEVEAYCQPCVSPVWDTSLTAHAMLEAGGDAAFDAAKGGLDWLVPKQVLDVKG
DWAVKRPDLRPGGWAFQYNNAHYPDLDDTAVVMMAMDRARKHAGITDYDHAIDRGREWIL
GMQSRDGGFAAFDVDNLEHYLNHIPFSDHGALLDPPTEDVTARCVSMLAQLGETVQTSRP
MADAVEYLRRTQLADGSWYGRWGLNYIYGTWSVLCALNAAGIDHQDPMMRRAVTWLLSVQ
NADGGWGEDAVSYRLDYKGYEQAPTTASQTSWALLALMAAGEVEHPAVARGMRYLIDTQT
EKGLWDEARYTATGFPRVFYLRYHGYAKFFPLWALARFRNLKSTNSKTVRVGM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgatcatgcggaggccaccgtttcgaatgcggcgctggaaagcagcatcgac
gcggcgcggcagggcctgctcggattccgccagcctgacggccactgggtgttcgagctt
gaggcggacgtcacgatcccctccgaatacgctctgctgcgtcactatctcgccgagccc
gtcgatcacgagctggagcgcaagatcggcaactacattcgccgcacccagggcacgcat
ggcggctgggcgctggtgcaggacggcccgttcgacatgagcgccagcgtgaaagcatac
ttcgcgctgaagatgatgggcgtcgatcccaacgagccctatatggcgaaagcgcgcgag
gcgatccgttcgcgcggcggagcgatccatagcaacgtgttcacgcgcttcatgctgtcg
atgttcggtgtgctgacctggaagagcgtgccggtgctgccggtcgagatcatgtttctg
ccgttctggtttccgtttcacctcaacaagatgtcgtattgggcccgcgccaccatcgtg
ccattgatggtgctgactgcgaaaaagccgcgtgcgcagaatcttggcgagatcgatatc
cgcgaacttttcctgcaggatcccaagctgatcggccgcaccgcgcgcgcgccgcaccag
agccgcgcgctgttcgccttcttcaccggcatcgacatgctgctgcgcgctgccgaaccg
ttcttccccaagaagctgcggcagcgcgcgatcgacaaggcggtggcctttgtcgaggag
cggctgaacggcgaggacgggctcggcgcgatctatccgccgatggccaataccgtgatg
atgtacgaggtgctgggctttcccgcggaccatccgccgcgcgccactacccgccgcggc
atcgacaagctcctggtgatcggcgaggtcgaagcctattgccagccctgcgtctcaccg
gtgtgggacacctcattgacggcgcatgccatgcttgaggccggcggcgatgccgccttc
gatgccgcgaagggtggcctcgactggctggtgccgaagcaggtgctggacgtcaagggc
gactgggcggtgaagcgacccgatctgcggccgggcggctgggctttccaatacaacaac
gcccattatcccgatctcgacgataccgccgtggtgatgatggcgatggaccgcgcgcgc
aagcacgctggcatcaccgactatgaccacgcgatcgaccgcggccgggagtggatcctg
ggcatgcagagtcgcgatggcggcttcgcggcgttcgacgtcgataatctcgaacattat
ctcaaccacatcccgttttcggaccacggcgcgttgctcgacccgccgaccgaggatgtc
acggcgcgctgcgtctcgatgctggcgcagctcggcgagaccgtccagaccagcaggccg
atggccgatgccgtcgaatatctgcgccgtacccagctcgccgacggctcctggtatggc
cgttggggcctcaattacatctatggcacctggtcggtgctttgtgctctcaacgccgcc
gggatcgaccaccaggacccgatgatgcgccgggccgtgacttggctgctgtcggtccag
aacgccgatggcggctggggcgaggacgccgtcagctaccggctcgactacaagggctac
gagcaggcgccgaccacggcgtcgcagacctcatgggccttgctggccctgatggcggcc
ggcgaggtcgagcatccggcggtggcgcggggaatgcgatacttaattgacacacagacc
gaaaaaggcctgtgggatgaggcgcgctacaccgcaacaggcttcccgcgcgtattttat
ttgcgttatcatggatatgcgaagttcttcccgctctgggcgctggcccggttccgcaat
ttgaagagcaccaacagcaagacggtaagggtcgggatgtga
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