Trichosporon asahii var. asahii: A1Q1_00105
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Entry
A1Q1_00105 CDS
T06566
Name
(RefSeq) ATP-dependent RNA helicase DBP2 (p68-like protein)
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A1Q1_00105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasa03041
]
A1Q1_00105
03009 Ribosome biogenesis [BR:
tasa03009
]
A1Q1_00105
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A1Q1_00105
Spliceosome [BR:
tasa03041
]
Complex A
U1 snRNP components
U1 related factors
A1Q1_00105
Complex B
A1Q1_00105
Ribosome biogenesis [BR:
tasa03009
]
Eukaryotic type
Pre-60S particles
Helicases
A1Q1_00105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
25983619
NCBI-ProteinID:
XP_014184421
UniProt:
J8QHB8
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MSNLGSGLRTVDWNNTELTKFEKNFYIEDKAVSARSDAEIAEFRRAKDMRIQGTNIPRPI
TSFEEAGFPEYVMSEIRAMGFKEPSPIQCQAWPMALSGRDVVAIAETGSGKTISFALPAM
VHINAQPLLAPGDGPIVLILAPTRELAVQIQAECTKFGKSSRIRNTAVYGGAPKGAQIRD
LQRGCEIVVATPGRLIDMLESGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDR
QTLLFSATWPKDVQRLAQDFLNDYIQVNIGSEDLTANHNVAQHVTVCTDYDKRSMLLKHL
DQISRENAKVLIFVGTKRVADDLTKFLRQDGWPALAIHGDKQQAERDWVLAEFKSGRSPI
MLATDVASRGLGRFSHYTHLLCTAVGS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccttggctctggtctccgcaccgtcgactggaacaacactgagctcaccaag
ttcgagaagaacttctacatcgaggacaaggctgtctctgctcgctctgacgctgagatc
gccgagttccgccgtgccaaggacatgcgcatccagggaactaacattcctcgtcccatc
acttcgttcgaggaggctggcttccccgagtacgttatgtccgagatccgtgccatgggc
ttcaaggagccttcgcccattcagtgccaggcctggcccatggctctctctggtcgtgat
gtcgttgctatcgccgagactggttcgggtaagacgatctccttcgctcttcccgccatg
gtccacatcaacgcgcagcccctgcttgcgcccggcgacggccctatcgtccttattctt
gcccccacccgtgagctcgctgttcagattcaggccgagtgcaccaaattcggcaagtcg
tctcgcatccgcaacactgccgtctacggtggtgcccctaagggtgctcagatccgtgac
ctccagcgcggctgtgagatcgttgttgctactcccggtcgtctgattgacatgcttgag
tctggtaagaccaacctcaagcgcgtgacctacctcgttatggacgaggccgaccgcatg
ctcgacatgggtttcgagcctcagatccgcaagatcgtttctcagatccgtcccgaccgt
cagactcttctcttctctgccacctggcccaaggacgtccagcgtctcgctcaggacttc
ctgaacgactacatccaggtcaacattggttccgaggacctgaccgccaaccacaacgtt
gcccagcacgttaccgtttgcaccgactacgacaagcgttcgatgctcctcaagcacctc
gaccagatctcgcgtgagaacgctaaggtcctcatcttcgttggcaccaagcgtgttgct
gatgaccttaccaagttcctccgtcaggacggctggcctgccctcgccattcacggtgat
aagcagcaggccgagcgtgactgggttcttgccgagttcaagtcgggccgcagccccatt
atgcttgccaccgatgttgcttcgcgtggtcttggtaggttttcccattacactcacctc
ttgtgcacagctgtcggctcttga
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