KEGG   Trichosporon asahii var. asahii: A1Q1_00886
Entry
A1Q1_00886        CDS       T06566                                 
Name
(RefSeq) DNA-directed RNA polymerase ii 13.3 kDa polypeptide
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
tasa  Trichosporon asahii var. asahii
Pathway
tasa03020  RNA polymerase
tasa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A1Q1_00886
  09124 Replication and repair
   03420 Nucleotide excision repair
    A1Q1_00886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tasa03021]
    A1Q1_00886
   03400 DNA repair and recombination proteins [BR:tasa03400]
    A1Q1_00886
Transcription machinery [BR:tasa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     A1Q1_00886
DNA repair and recombination proteins [BR:tasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      A1Q1_00886
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 25984400
NCBI-ProteinID: XP_014181261
UniProt: J5QZT5
LinkDB
Position
Unknown
AA seq 160 aa
MSGRINQPNRVETWLLQDGEKRLTISEDAKIPNAATFVLRAQDHTLGNMLRAQLLLDPTV
LFAGYKLPHPLENVISIKIQTDERSNPADALKRACQQLINQTLSIKKQFQDQARNIEMGM
GPDAAVAQPATGGYDPYGDGFGAATQVPARDNNAGDVYDF
NT seq 483 nt   +upstreamnt  +downstreamnt
atgtcgggacgtatcaaccagccgaaccgagtcgagacgtggctgctgcaggatggagag
aagcgcctgacgatctcggaggacgccaagatcccgaatgcggcgacctttgtcctgcgc
gcgcaggatcatacgctgggcaatatgctgagggctcagctccttctcgacccgacagtg
ctcttcgcgggctacaagcttccgcacccgcttgagaacgtgatcagcatcaagatccag
acggacgagcgctccaaccccgccgacgcgctgaagcgcgcgtgccagcaactcatcaac
cagacgctcagcatcaagaagcagttccaggaccaggcgcgcaacattgagatgggcatg
ggccccgatgccgccgtcgcccagcccgcaactggcggatacgacccgtacggagacggc
ttcggcgccgcgacgcaggtgcctgcgcgcgacaacaatgcgggagacgtgtacgacttc
tag

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