Trichosporon asahii var. asahii: A1Q1_01012
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Entry
A1Q1_01012 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
A1Q1_01012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasa03021
]
A1Q1_01012
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_01012
Transcription machinery [BR:
tasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
A1Q1_01012
RNA polymerase I system
A1Q1_01012
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
A1Q1_01012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW2_Spt5
KOW4_SPT5
KOW1_SPT5
KOW5_SPT5
KOWx_SPT5
KOW
Spt5_N
CTD
F-box-like
DUF150_C
Motif
Other DBs
NCBI-GeneID:
25984526
NCBI-ProteinID:
XP_014181110
UniProt:
J4UEX2
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MDMEEDPMQELRSIASTVDAPRRPLGLDKMFLRAKNWKTSGPSAPVRPPTPEIIPLPPPM
PLPEVDANGVSPMSQVFEYADLAPLVLEEITNPKDMARMCRVCKEWNHMLRRRLYRDVGG
GSEAEGGLSTVQADIRFFPLDIQGEQRVLLEDKIEKALGDMEGLERLVWTMHFDPNMIGR
MRSLRELRVMMPDQQFRLALLEIAAALDQRPIGGLERALLKRRVDGSDSAVYAIAEEVHP
HRPHTDNENGRVSPSRRCTGSGGARSRCASTFSPDLEHLHTFSLSFEGKHDPRHPTRRIV
IEPADLPVLRHTESLRALELTISASRDAIQRQHLLPPHSLDSLMAQVNFGALTRLALLNI
VVSTEVLTAILENTTLNELYISVARHETLTECDALLRAPLHVLHANAPAQFGPDRTHLGL
LAASMPLVEEIGSLNQEDEEEEQQETHHRRHRPDPDEEDEDEEDEDGEGGGHDDDDDEED
EEDEDDDEGVAEFIEEGAGDDSTPADRMRHRNLEREMRRDEEENIDEILQGIKERHRRQV
RYNTEGDQVPQRLLMPGVEDPSLWQVRVKLGRERAITASIFRKVFKSGIPVISVFYRDSL
PGLIYLEARQSADVNSALQGIVGVYLSRGIQLVPIEEMAPLLRIKKKEIDLVPGMWVRLK
RGKHTGDLAQVIDIDQLTSGVVGVKFVPRIDMTPREKKTERLGNGKGGLGGNFRPPQKLF
NYEEVRRVYGKQNVRHGQGNSHIFDGDEYIDGFCYKDMKIALLTTEDVQPTLEEVSTFSG
EDATGRIDLSTIADANRSISASFLTPGDQVEVFEGELTGILGKVETIEGDTISIKAIGGE
IHGQTVEVPARSVRKKFDVGEHVKITNGKNANVSGMIVDVNGEVVTLMSDQGQQEIKVFS
KDVRKAADVASGDSATVTQQQGLYEPHELVMLDSTTAGVITKVEGSMLRVLDQNGMHRTV
STNEVTLRRDNARYAVATDSTGAELRCGDKMKETDGENRRGEVINISRSIFVFLHNREYS
ENNGVFVARATSLVSLTPKASTDLTKQNPALNAQLHQMNLMPPPQSVGNRRIINTPVVVT
RGTYKGLLGTIKDVVGAAEARVELATNNKTITIQTAFLKRKDPKTGATYPLDTGNFGAGG
GGGGRGGYGGGGGGYDTYNGGGRTVNPYGGATPGGQFGRTPNPYSSGYGKTPNPYASSGG
KTPGWGAGGGKTPAPGWSGGGGKTPGWAGGGGKTPAWGGAGGRTPAPQYGGDGGRTPAPS
WSGGGGGKTPNPYASAPTPAAYNDPGTSRPISAPTPGAYGGAAFSAPTPGAALSAPTPAP
AGGFSAPTPYSAPTPGAGLSAPTPGVFAAPTPGAGLSAPTPAVFGAPTPFAPAPAGVPNA
SGIPWDWALDFRNVLVTVGPSQRPGSRNPRHFQRGFYDGQQMGIESTVNESVVCRVLDGG
SSETLEIPAEYLQPVRPDGEGQEVIVISGDPAMKGQQRRTAYRNDQQWMMEQAPSDMMAL
VMDENDLARIWHTE
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaggaagacccgatgcaggagttgcgctcgatcgcgtctacggtggacgca
ccgcgccgaccgctagggttggacaagatgtttcttcgagcaaagaattggaagacgtct
ggaccaagcgccccagttcgtccaccgacgccggagatcatcccgttaccaccacccatg
ccgctaccggaagtcgacgccaacggcgtgtcaccgatgtcgcaggtgttcgagtacgca
gacctcgcaccgcttgtgctcgaagagatcacgaacccaaaggatatggcgcgcatgtgc
cgagtctgcaaggagtggaaccacatgctgaggcggagactataccgcgacgtgggagga
ggctccgaagccgaaggtgggctgtcaactgtgcaagcagatattcgcttcttccctctc
gacattcagggcgagcagcgtgtcctccttgaggacaagattgagaaggcactcggggac
atggagggtctcgagcggctagtatggacaatgcactttgacccgaatatgattggccgc
atgcgttcgcttcgcgaactgagagtcatgatgcccgaccagcagttccgcttggcgctg
ctcgagattgcagcggcgctggaccaacgtccgatcggcggcctcgagcgtgcccttctt
aaacgacgagtggatggctcggatagcgccgtatatgcgattgctgaagaagttcaccct
catcggccgcacacggataacgagaacgggcgtgtttcaccttctcgacgctgcaccggg
tctggaggagctcgttctagatgcgcctccacattctcgccggatctcgagcacctgcac
acgttctcactgtcgtttgaaggaaagcatgacccccggcatccaacacgacgcatcgta
atcgagccggctgacctgccagtgctccgacacacggagtcgctgcgggcgcttgagctc
acgatatcggcgtcgcgagacgccattcaacgccagcaccttcttccgcctcactcactt
gactcgctcatggcgcaggtcaactttggagcactgacgagactcgccctcttgaatatc
gtggtgtcgactgaggttttgaccgccatcctcgaaaacacaacactgaacgagctgtac
atcagtgtagcgcggcatgagacactgacggagtgcgatgctcttctgagggcccctttg
catgtgcttcatgcaaacgcaccggctcagttcggccctgatcggacgcacctgggcctc
cttgccgcctcgatgccgctggtcgaggagatcgggtcgctcaatcaggaggacgaggag
gaggagcagcaggagacgcaccaccgacgccatcgtccggacccggatgaggaagatgag
gacgaggaagatgaggatggagagggcggtggccacgacgacgatgatgacgaggaggat
gaggaagacgaagacgacgatgaaggagtcgccgagttcatcgaggagggtgccggcgac
gactcgacgcccgccgaccgcatgcgccatcgtaacctcgagcgcgagatgcgtcgcgac
gaggaggagaacatcgatgagattctccagggcatcaaggagcgacacaggcgccaggtc
aggtacaacaccgagggtgaccaggttccccagcgtcttctcatgcccggtgtcgaggac
ccgagcctgtggcaggtgcgcgtgaagctcggccgtgagcgtgcgatcactgcgtccatc
ttccgcaaggtgttcaagtctggcatccccgtcatctccgtcttctaccgcgactcgctc
ccgggtctgatctacctcgaagcccggcagtctgccgatgtcaactcggcgttgcagggc
attgtcggtgtgtacctctcccgaggcatccagctcgtgccgatcgaggagatggcccct
cttcttcgcatcaagaagaaggagatcgaccttgttcccggcatgtgggtccgtctcaag
cgcggaaagcacactggcgacttggcacaggtcatcgacatcgaccagctcacctctggt
gttgttggtgtcaagtttgtgccccgtatcgacatgacgccgagagagaagaagacggag
cgtctcggcaacggcaagggcggtcttggtggcaacttccggccaccgcaaaagctgttc
aactacgaggaggtccgccgcgtgtatggcaagcagaatgtgcgacacgggcagggcaat
agccacattttcgacggcgacgagtacattgatggcttctgttacaaggacatgaagatt
gctctcctcacgaccgaggacgttcagcccacgctcgaggaggtctcgacctttagcggc
gaggatgcgacgggccgcattgacctgtcgaccattgctgatgcgaaccgcagcatcagc
gcctcgttcctcaccccgggtgaccaggttgaggtgtttgagggagagctcacgggcatc
ctcggcaaggtcgagacgattgagggcgatacgatctcgatcaaggctatcggcggcgag
atccacggacagactgttgaagtcccggcccgctcggtgcgcaagaagttcgacgttggt
gagcacgtcaagatcacgaacggcaagaacgcgaacgtgtcgggtatgatcgtcgatgtc
aatggcgaggtcgtgaccctcatgtcggaccagggccagcaggagatcaaggtgttctcg
aaggatgtgcgcaaggcggcggacgtcgctagcggcgactccgccactgtcacccagcag
cagggtctgtacgagccccatgagctggtcatgctcgactcgaccacggctggtgtcatt
accaaggttgagggcagtatgctacgcgtcctggaccagaacggtatgcaccgtacggtc
agcacgaacgaggtcacgctgcgacgagacaatgcccgctacgccgttgcgacggactcg
accggcgccgaactccgctgcggagacaagatgaaggagaccgatggcgagaaccgccgc
ggagaggtcatcaacatctcgcgctccattttcgtcttcctgcacaaccgcgagtactcc
gagaacaatggtgttttcgttgcgcgtgcgacgtcgctcgtctcgctcacgcccaaggcg
agcaccgacctcacgaagcagaacccggctttgaatgctcagctccaccagatgaacctg
atgcccccgcctcagtcggtaggtaaccgtaggattatcaacactccggttgtcgttacc
cgtggaacgtacaagggtctccttggtacaatcaaggacgttgtcggagctgcggaggca
cgtgtcgaactggccacgaacaacaagacgatcacgatccagactgccttcctgaagcgc
aaggaccccaagacgggtgctacatacccgctcgacaccggtaacttcggtgctggtggt
ggtggtggcggccgcggcggctacggaggcggcggtggtggctacgacacgtacaatggt
ggcggccgcactgtcaacccgtacgggggcgccactccgggtggtcagtttggccggacg
ccgaacccatactcgtccggttacggcaagacccccaacccgtacgcctccagcggaggc
aagactccgggatggggagcgggcggtggcaagactcccgcacccggatggagtggcggt
ggtggcaagacgcctggatgggccggaggtggtggcaagacgcctgcctggggaggagcc
ggtggcaggacgcctgccccgcagtatggcggagacggtggtcgcacccctgcgccgtcg
tggtctggaggcggtggcggcaagacgcccaacccgtacgcttcggctcccacgccggct
gcctacaacgacccgggaacatcacgacccatctctgctcctacgccaggcgcttacggc
ggagctgcgttcagcgcccccacacctggcgccgctctcagcgccccgaccccagctcct
gctggcggcttcagcgctcccacgccctactctgcgccgacacctggtgctggtcttagc
gcgcccaccccgggtgttttcgctgctccgacgccgggcgccggcctgtcggcccctacg
cccgctgtctttggtgcgccgacgccgttcgcccccgcacccgctggtgtgccgaacgct
tcgggcatcccgtgggattgggcgctcgatttccgcaacgtgctcgtcacggtcggacct
tcgcagcgtcccggctcgcgcaacccgcgacacttccagcgtggcttctacgacggacag
cagatgggtatcgagagcacggtcaacgagagcgtcgtgtgccgcgtgctcgacggcggc
agcagcgagacgctcgagatccccgccgagtatctgcagcctgtccggcccgacggcgag
ggccaggaggtcatcgttatcagcggcgaccccgcgatgaagggccagcagcgccgcacg
gcgtaccgcaacgaccagcagtggatgatggagcaggcgccgtcggacatgatggcgctg
gtcatggacgagaacgacctggcgcgtatctggcacacggagtag
DBGET
integrated database retrieval system