Trichosporon asahii var. asahii: A1Q1_01018 Help Entry A1Q1_01018        CDS       T06566                                  Name (RefSeq) ATP dependent helicase   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism tasa  Trichosporon asahii var. asahii Pathway tasa03013   Nucleocytoplasmic transport tasa03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:tasa00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     A1Q1_01018    03015 mRNA surveillance pathway     A1Q1_01018  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tasa03019]     A1Q1_01018 Enzymes [BR:tasa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      A1Q1_01018     5.6.2.5  RNA 5'-3' helicase      A1Q1_01018 Messenger RNA biogenesis [BR:tasa03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      A1Q1_01018    mRNA cycle factors     Common to processing body (P body) and stress granule      A1Q1_01018 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 SLFN-g3_helicase UvrD-helicase ResIII Viral_helicase1 NPHP3_N DEAD Ribosomal_S13_N AAA_22 nSTAND3 NAT10_TcmA_helicase PhoH AAA_16 ATPase UvrD_C_2 Motif Other DBs NCBI-GeneID:  25984532 NCBI-ProteinID:  XP_014181116 UniProt:  J5T9I8 LinkDB All DBs Position Unknown AA seq 1013 aa AA seqDB search MDPFTTFEGASQYGVDQDDTTSMYSATPSNLTEQIIVPQRTTGLERGIDEISLTSRPVNN FGEEYDRDDEPPLGHGVEHACSPQSVVKWFCNSRGNTSASHIVSHLVKAKHKEVVLHKDS PLGDTILECYNCTNKNVFMLGFIAAKNEAVVVILCRHPCASTTTSRDINWDPSEWSAIIH DRSFLSWLVKVPSEAEQLRARQISMAQIAKLEEMWRDNPNAKLEDAEAQDAYQYQNILGP LVKIEADYDKRMKESQGESDISVRWDMGLNQKRTAWFTMPKLESGEVRLAVGDELRLKLV GASMKGWANMGNSSDNLWEGVGSVIKVPDNVDDWIVLEMRRSDNVPTDCREGFAVDFVWK ATSFDRMQQAMKTFAIDEKSVSGYILLGHEVDPQVLRTQMPKRFTAPGLPELNHSQMAAV KAVLQKPLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPSNVAVDHLAEKIHMTGL KVVRLTAKSREAVDSPVSYLTLHEQVAKNDTRRELQKLIQLRNELGELSQSDERKYKSLV RACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLVDEATQAAEPEAMIPLVMGCKQAVL VGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNRPIRLQVQYRMHPCLSEFPSNMFYEG TLQNGVTAPERLRKNVDFPWPVADTPMMFHQNTGTEEISSSGTSFVNRTEAANVEKMVTK FFKSGVLPSQIGVITPYEGQRSFIVSYMQLHGALKKDLYKEVEVASVDAFQGREKDYIIL SCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKPSMMQFSKPRKTLSRAME SFRRFEPPANDYAEKNARGGPAPSRFDPAYYRTHDAISYVPADAQSVVSQALTQSFPLAA HPYPGAGPSGRKSTYTGYASSVISQQPADGAPDPLGTGHALAPMSSRASSIAYSQFDRLP PGPALDKKPAGLGQRRLSIGSITPSDAVSSYGYKAGDDDTQSIAPSQAGVTEF NT seq 3042 nt NT seq  +upstreamnt  +downstreamnt atggacccgttcaccaccttcgagggtgcgtcccagtacggcgtcgatcaggatgacacg acgtccatgtacagcgctaccccgagcaacctcacagagcaaatcattgtccctcagcgt accactggactagagcgcgggatcgacgagatctccctcacttcccgccccgtgaacaac ttcggagaggagtacgaccgtgatgatgagccaccacttggccacggcgttgagcacgcg tgcagtccccagagtgtggtcaagtggttctgcaactcaagaggcaatacgagtgcgtcg cacatcgtcagtcacctcgtcaaggcgaagcacaaggaagttgtcctacacaaggacagt cctcttggagacaccattcttgaatgctacaactgcacgaacaagaacgtcttcatgctc ggcttcattgcggcgaagaacgaggctgtcgtcgtgattctgtgtcgccacccgtgcgcc tccacgacgacttcgcgcgacatcaactgggatccgtcagagtggtccgccattatccac gaccgctccttcctcagctggctcgtcaaggtcccctctgaggcggagcagctgcgcgct cgacagatctcgatggcgcagattgccaagctcgaggagatgtggcgcgacaaccccaac gcgaagctcgaggatgctgaagctcaggatgcgtaccaatatcagaacatccttggaccg ctggtcaagatcgaggccgactacgacaagcgcatgaaggagtcgcagggagagagcgat atcagtgtgcgctgggacatgggtctgaatcagaagcgcactgcgtggttcaccatgccg aaactcgagagcggagaagtgcgcttggcggtcggtgacgagctgcgcctcaaactcgtg ggcgccagcatgaaggggtgggcgaacatgggcaacagctctgacaacttatgggagggc gttggcagcgtcatcaaagttccagacaatgtcgatgactggattgttctggagatgaga cgatcagacaacgtgcccaccgactgcagggaaggcttcgccgttgactttgtctggaag gcgaccagcttcgaccgtatgcagcaggccatgaagactttcgctatcgacgaaaagagt gtttcgggctacattctgcttggtcatgaggtggacccgcaggtcttgcgcacacagatg ccgaagcgcttcactgcacctggcctgcccgagctcaaccactctcagatggctgccgtc aaggctgtcctgcagaagccgctcagtctgatccaaggtccgcctggtaccggtaagact gtcacgtcggcgtcgatcgtgtaccacctctcgaagatgaacccgggacaggtgcttgtt tgtgccccgtccaacgtcgccgtcgaccatctcgccgagaagattcacatgaccggtctc aaggttgtgcgtctcactgccaagtcgcgtgaggccgtcgactcgcctgtcagctacctg acccttcacgagcaggtcgctaagaacgacactcgacgtgaactccagaagcttatccag ctccgcaacgagcttggagagctgagccagagcgacgagaggaagtacaagtcgctggtc cgtgcttgcgagaaggacatcctcaacgccgccgacgtcatctgcacgacctgtgtgggt gctggtgacccccgcctggccaagttcaagttcaggaccgtgcttgtcgacgaggcaacc caggccgccgagcccgaggccatgatcccgctcgtcatgggatgcaagcaggccgttctc gtcggagaccaccagcagcttggccccgtcatcatgaacaagaaggctgcccgtgctggt ctctcgcagtcgctcttcgagcgtcttgtcatcctcggcaaccgtccaatccgtctgcag gtgcagtaccgtatgcacccgtgtctgtcggagttcccctcgaacatgttctacgagggt actctgcagaacggtgtcacggcgccggagcgcctgcgcaagaacgtcgatttcccctgg cccgttgccgacacgccgatgatgttccaccagaacactggcactgaggagatctcgtcg agcggtacctcgttcgtgaaccgcactgaagccgccaatgttgagaagatggtgaccaag ttcttcaagtcgggcgtccttccctcgcagatcggtgttatcacgccatacgagggccag cgttcgttcatcgtctcttacatgcagctgcacggcgcgctcaagaaggatctgtacaag gaagtcgaggttgcgagcgtcgacgcgttccagggacgagagaaggactacattatcctg tcgtgtgtacgttcgaacgagcaccagggtatcggtttcctgaacgaccctcgccgtctc aacgtcgcgctcacccgtgccaagtacggtgtcgtcatcctcggcaacccgaaggttctc agcaagccgagcatgatgcagttcagcaagccgcgcaagacgctgtcgcgcgccatggag tcgttccgccgtttcgagcctcccgccaacgactacgccgagaagaacgcccgcggaggc cccgctcccagccgcttcgacccggcatactaccgcacgcacgacgcgatctcctacgtt cctgccgatgcgcagagcgtggtgtcgcaggctctcacgcagagcttcccgctcgccgct cacccgtaccccggcgccggacccagcggacgcaagtcgacgtacaccggctacgcgtcg tcggtcatctcgcagcagccggccgacggcgcgcccgacccactcggcaccggccacgcg ctggctcccatgtcctcgcgcgcgtccagtattgcgtactcccagttcgaccgtctgcct cccggaccagcgctcgacaagaagccggccggcctcggccagcgccgcctgtccatcggc tcgatcacgccgtcggacgccgtctcctcgtacggatacaaggcaggtgacgacgacacg cagtccattgctcccagccaggctggcgtcaccgagttctaa

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