Trichosporon asahii var. asahii: A1Q1_01375
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Entry
A1Q1_01375 CDS
T06566
Name
(RefSeq) 3'-to-5' phosphorolytic exoribonuclease, Ski6p
KO
K11600
exosome complex component RRP41
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1Q1_01375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_01375
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
A1Q1_01375
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
A1Q1_01375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
25984889
NCBI-ProteinID:
XP_014179889
UniProt:
J5T6S8
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MSRIEILNLAGLRHDNRRPFELRSLSCALGVHPQADGSSQVSQGLTTVQAAVFGPREPKQ
KAGAAHDKANVVVEVGVVPWAQGQGQGRGRTRGDKRLLEIGAAIRQTFEPVIQVGLYPRS
EIAVQVQVLQADGGILPTAINAVTLALIDAGIAMHDYVTSVSVGLHLTQALLDLSAPEEN
DLPSLVVASLPNSGKITLAQMETRLHVDRFEVMLRLGTEACKVIKDDMEQVVKTRTERVV
DRMSVATRTVAVEA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaatagagatcttgaaccttgctggtctccgacacgacaacaggcgtccgttc
gaactgcgttccctctcgtgcgcgcttggcgtacacccgcaagcggacgggagttcgcag
gtctcgcagggtctgacgacggtgcaggcggctgtgtttggaccgagggaaccgaaacag
aaggcaggtgcagcgcacgacaaggccaatgttgtcgttgaggtcggcgtcgtgccgtgg
gcgcagggacaggggcagggtcggggacggacacggggtgacaagcgcctgctcgagatt
ggagctgccattcgacagaccttcgagcccgtgatccaggtcgggctgtacccgcgctcc
gagattgcagtgcaggtgcaggtcctgcaggctgatggcggtattctgcccacagcgatc
aatgcagtgacgctcgcgctcatcgacgccggcatcgcgatgcacgactacgtcacctcc
gtctctgtcggactgcacttgacgcaggcgctgctggatcttagcgcaccggaggagaac
gacctgccgtcgcttgtggtcgcgagcctgccgaacagcggcaagattacgctcgcgcag
atggagacgaggctgcacgtcgaccgcttcgaggtgatgctccgtctcggcactgaggcg
tgcaaggtcatcaaggacgatatggagcaggtcgtcaaaacgcgcacggaacgggtcgtc
gaccgcatgtccgttgcgacgaggactgtggcagtggaggcgtag
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