KEGG   Trichosporon asahii var. asahii: A1Q1_01450
Entry
A1Q1_01450        CDS       T06566                                 
Name
(RefSeq) RNA processing-related protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tasa  Trichosporon asahii var. asahii
Pathway
tasa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    A1Q1_01450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tasa03041]
    A1Q1_01450
Spliceosome [BR:tasa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    A1Q1_01450
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st PRP4 WDR90_beta-prop_4th Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 25984964
NCBI-ProteinID: XP_014179964
UniProt: J5QW88
LinkDB
Position
Unknown
AA seq 524 aa
MEVDLDDLNDERERAQNAALHEQLERKKRMRRMAVPTDDRKVRERLRAFGEPITLFGEGP
GDRRDRLKIIQESYEREKGAPLEVDSSDSSDDDDDEFYTEGSEDLLKARRAIARYSLSRA
RRRLAKQRIEVNMPLSKIVNVRKEVYSDLRTFNVLGSQFGDDRPLSTIRFSPNSKLILTT
SWTGATKIWDLPNLNQVSVHKGHEEKISGGDWHPDATIGLSPEAVNFATGGGEGTVKLWS
LNSEKPLASLEGHLARVGRVAFHPSGAFVGSAGFDGTWRLWDVATQKELLIQEGHSKEVI
ALAFQDDGALVSSAGFDGIGRVWDLRTGRTAMVLDGHAKEILSMDFAPNGFQLATGSGDN
TIRIWDLRALKTQDTIPAHNSSVADLRFYRAANENPFIPLDAPIDTTSLPDASVKTNGAS
ADDVSGDKPEQDDSKMDVDNAANGSSAATSASSTELSRSGLFLVSAGFDGHVRAWSADEW
RLVRDLATDAGKVMSADVSRDGKFIASASYSRSFHLFGGEHSLE
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggaagtcgaccttgacgatctcaatgacgagcgcgagcgtgcccaaaatgcggctctc
catgagcaactggagcgcaagaagcgcatgcgccggatggcggtcccgacagacgatcgc
aaggtgcgggagcgtctgcgtgcattcggagaacctattacactttttggtgaaggtccc
ggagacagacgagaccgtctgaagatcatccaggagagctatgagagggagaagggcgcg
cctcttgaggttgactcaagcgatagctcggatgacgacgacgacgaattctacacggag
ggatccgaagatcttctgaaagctaggcgagccatcgcccgctattcactatcacgagcc
cgccggagattagcgaaacagcgcatcgaagttaacatgcccctcagcaagatcgtgaac
gtccggaaggaggtttactccgatctgcgaacgttcaacgtcctcggctcgcaatttggt
gatgaccgaccactctccaccattcgtttctctccgaattcgaagctcatcctgaccacg
agctggaccggagcgaccaagatttgggatcttcccaacctgaaccaggtttcagtgcac
aagggtcacgaggagaagattagtgggggagattggcacccagatgcgaccattgggctt
tctcccgaggccgtcaacttcgctaccggaggaggagagggaacggtgaaactgtggtct
ctaaacagcgaaaaacctctggcttctcttgagggccacttggcgcgtgttggtcgtgtg
gccttccacccttcgggagccttcgtgggatcagccggctttgacggaacatggaggctc
tgggacgtcgcgacgcagaaggagcttctcatccaagagggacacagcaaggaggtgatc
gctcttgccttccaggatgacggtgctctcgtgtcgtcggctggtttcgatggcattggc
cgtgtctgggacctgcggacgggcagaacggccatggttctcgacggtcacgcaaaggag
attctctctatggactttgcgccgaacggcttccaactcgcgacgggatcaggcgacaac
acgattcgtatctgggatctgcgcgccctcaaaacgcaagacactatcccggcccacaat
agcagtgttgctgacctgcgcttctaccgtgcggcgaacgagaaccccttcatccccctc
gatgcccctatcgacacgacatccttgcccgatgctagtgtcaagacgaacggagcctcg
gccgatgatgtcagcggcgataaacccgagcaggacgacagcaagatggatgtggacaac
gcagcgaacggctcgtcagcggcaacatcagcttcgtcgactgagctgtccaggtctggg
ctgtttttggtatccgctggcttcgatggacacgtccgagcgtggagcgcggatgaatgg
cgtctcgtccgagacttggccacggacgctggcaaggtcatgtcggcggatgttagccgg
gacggcaagttcatcgcgagcgccagctacagccgatcattccatctctttggaggagag
cattcgctggagtag

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