Trichosporon asahii var. asahii: A1Q1_01450
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Entry
A1Q1_01450 CDS
T06566
Name
(RefSeq) RNA processing-related protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A1Q1_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasa03041
]
A1Q1_01450
Spliceosome [BR:
tasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
A1Q1_01450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
PRP4
WDR90_beta-prop_4th
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
25984964
NCBI-ProteinID:
XP_014179964
UniProt:
J5QW88
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MEVDLDDLNDERERAQNAALHEQLERKKRMRRMAVPTDDRKVRERLRAFGEPITLFGEGP
GDRRDRLKIIQESYEREKGAPLEVDSSDSSDDDDDEFYTEGSEDLLKARRAIARYSLSRA
RRRLAKQRIEVNMPLSKIVNVRKEVYSDLRTFNVLGSQFGDDRPLSTIRFSPNSKLILTT
SWTGATKIWDLPNLNQVSVHKGHEEKISGGDWHPDATIGLSPEAVNFATGGGEGTVKLWS
LNSEKPLASLEGHLARVGRVAFHPSGAFVGSAGFDGTWRLWDVATQKELLIQEGHSKEVI
ALAFQDDGALVSSAGFDGIGRVWDLRTGRTAMVLDGHAKEILSMDFAPNGFQLATGSGDN
TIRIWDLRALKTQDTIPAHNSSVADLRFYRAANENPFIPLDAPIDTTSLPDASVKTNGAS
ADDVSGDKPEQDDSKMDVDNAANGSSAATSASSTELSRSGLFLVSAGFDGHVRAWSADEW
RLVRDLATDAGKVMSADVSRDGKFIASASYSRSFHLFGGEHSLE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgaccttgacgatctcaatgacgagcgcgagcgtgcccaaaatgcggctctc
catgagcaactggagcgcaagaagcgcatgcgccggatggcggtcccgacagacgatcgc
aaggtgcgggagcgtctgcgtgcattcggagaacctattacactttttggtgaaggtccc
ggagacagacgagaccgtctgaagatcatccaggagagctatgagagggagaagggcgcg
cctcttgaggttgactcaagcgatagctcggatgacgacgacgacgaattctacacggag
ggatccgaagatcttctgaaagctaggcgagccatcgcccgctattcactatcacgagcc
cgccggagattagcgaaacagcgcatcgaagttaacatgcccctcagcaagatcgtgaac
gtccggaaggaggtttactccgatctgcgaacgttcaacgtcctcggctcgcaatttggt
gatgaccgaccactctccaccattcgtttctctccgaattcgaagctcatcctgaccacg
agctggaccggagcgaccaagatttgggatcttcccaacctgaaccaggtttcagtgcac
aagggtcacgaggagaagattagtgggggagattggcacccagatgcgaccattgggctt
tctcccgaggccgtcaacttcgctaccggaggaggagagggaacggtgaaactgtggtct
ctaaacagcgaaaaacctctggcttctcttgagggccacttggcgcgtgttggtcgtgtg
gccttccacccttcgggagccttcgtgggatcagccggctttgacggaacatggaggctc
tgggacgtcgcgacgcagaaggagcttctcatccaagagggacacagcaaggaggtgatc
gctcttgccttccaggatgacggtgctctcgtgtcgtcggctggtttcgatggcattggc
cgtgtctgggacctgcggacgggcagaacggccatggttctcgacggtcacgcaaaggag
attctctctatggactttgcgccgaacggcttccaactcgcgacgggatcaggcgacaac
acgattcgtatctgggatctgcgcgccctcaaaacgcaagacactatcccggcccacaat
agcagtgttgctgacctgcgcttctaccgtgcggcgaacgagaaccccttcatccccctc
gatgcccctatcgacacgacatccttgcccgatgctagtgtcaagacgaacggagcctcg
gccgatgatgtcagcggcgataaacccgagcaggacgacagcaagatggatgtggacaac
gcagcgaacggctcgtcagcggcaacatcagcttcgtcgactgagctgtccaggtctggg
ctgtttttggtatccgctggcttcgatggacacgtccgagcgtggagcgcggatgaatgg
cgtctcgtccgagacttggccacggacgctggcaaggtcatgtcggcggatgttagccgg
gacggcaagttcatcgcgagcgccagctacagccgatcattccatctctttggaggagag
cattcgctggagtag
DBGET
integrated database retrieval system