Trichosporon asahii var. asahii: A1Q1_01535
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Entry
A1Q1_01535 CDS
T06566
Name
(RefSeq) ATP-dependent RNA helicase
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
tasa
Trichosporon asahii var. asahii
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tasa03009
]
A1Q1_01535
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A1Q1_01535
Ribosome biogenesis [BR:
tasa03009
]
Eukaryotic type
Pre-60S particles
Helicases
A1Q1_01535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4611
FRQ
CDC45
Prothymosin
Motif
Other DBs
NCBI-GeneID:
25985049
NCBI-ProteinID:
XP_014180049
UniProt:
J5QVK1
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MAPNVSDALLDSELTFASPPFSTLLDARILRALADLKFANPTLVQAKAIPLLLEGKDVLA
RARTGSGKTAAYVVPAVQRVLELKGATSPAESDYQVTRAVILVPTRELAMQVTNFVKSIS
TYCEGLVSVVNVASGATNVQKILLNDNPDIVVATPTKLLALLQSKSIDLAHLAFLAIDEA
DLLLSYGHKDDLTRIMDPAMGFVPKLGVQGCLMSATLSEDVEGVKGLVLRNPAILTLSEP
ATASSLLTQHFTFSSERDKFLLLFVLLKLKLIKGKSIIFVNDIERGYRVRLFLEQFGIKC
CVVNSELPLASRYHVVEEFNRGVYQVVIATDEASLGDEEPEDEEEESEAEEDAEEEQEEK
NAEAGPSKRRASSPAPGAPGKKKKRSAGSMARGIDFTSASSVINFDLPTTTTAYLHRVGR
TARAGHSGLALSFVVPKDQWGKDKSVSIKTAERDEQVFDRIKSKVKAEGGGDIKEWDWGG
RRGEIEGFRYRMEDALRAVTSKRVSDARREEVRRELLNSEKLKQHFAANPLDLAYLRHDA
PLHPGRTSSHLKHVPGYLMPKIAALPSGSGDVTDGQHIGFAKRGGGRGRGRGGRGRGGAR
GGKGRKVDPLKFKS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaacgtttctgatgcgctgctcgattccgagctgacctttgcttctcccccg
ttcagcacgctgctggacgcgaggattctgcgagctctcgcagacctcaaatttgcgaac
cctactcttgtgcaggccaaggccattccacttcttctcgagggaaaggatgttctcgcg
cgtgcccgaacggggagcggcaagactgctgcctacgttgtgcccgccgtccagcgtgtg
cttgagctgaagggcgctacttcgccggcagagtcagactaccaggtcactcgcgcagtg
attctggttcccacccgcgagctggctatgcaggtgaccaactttgtcaagtctatctcc
acctactgtgagggcctcgtttccgtcgtcaacgttgcctcgggtgctacaaacgttcag
aagatccttctgaacgacaaccccgacattgtcgttgctacgccgaccaagctgctggct
ctgctgcagtccaaatcgattgatctggctcaccttgcgttccttgccattgacgaggcc
gaccttcttctctcatacggccacaaggatgacctcacccgcatcatggacccggccatg
ggcttcgttcccaagcttggtgtccagggatgcctgatgagtgctacgctcagcgaggac
gtcgagggcgtcaagggacttgtgctcaggaaccccgcgatcctgacgctgtccgagccg
gccactgcctcatctctgctcacgcaacacttcaccttctcctcggagcgtgacaaattc
ctgcttctcttcgtcctgcttaagctcaagcttatcaagggcaagtcgatcatcttcgtt
aacgacatcgagcgcggataccgcgtccgtctgttcctcgagcagttcggtatcaagtgc
tgcgttgtcaactctgagctgcccctcgcctcaagataccacgtcgtcgaggagttcaac
cgcggtgtctaccaggtggttattgccactgacgaggcttccctgggagacgaggagcct
gaggacgaagaggaggagagtgaggccgaggaagacgccgaggaagagcaggaggagaag
aacgcggaggctggaccgtccaagcgccgcgcctcgtctcctgctcctggagcacctggt
aagaagaagaagcgtagcgctggttccatggcccgcggtatcgacttcacctctgcttct
tccgtcatcaactttgacctccccaccaccaccactgcctacctccaccgcgttggacga
acagcccgtgccggccactctggcctcgcactctcgttcgttgtaccaaaggaccagtgg
ggcaaggacaagagcgtctccatcaagacggccgagcgcgatgagcaggtctttgaccgt
atcaagtcaaaggtcaaggccgagggaggtggcgatatcaaggagtgggactggggagga
cgccgaggagagatcgagggcttccgctaccgtatggaggacgccctcagggctgtcacc
tccaagcgtgtgtctgacgcccgtcgtgaggaggtccgacgagagctgctcaacagcgag
aagctcaagcagcacttcgccgcgaaccctctcgacctcgcgtaccttcgtcacgacgcc
ccgctgcaccccgggcgtacttcaagccatctgaaacacgtccccggatatctcatgccc
aagattgcggcgctgccttccggatcaggtgatgtcaccgacggacagcacattggcttt
gcgaagcggggcggcggccgaggacgcggtcgaggcggtcgcggccgtggcggggcccga
gggggcaaggggcgcaaggttgatccgttgaagttcaagtcatag
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