Trichosporon asahii var. asahii: A1Q1_01592
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Entry
A1Q1_01592 CDS
T06566
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A1Q1_01592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_01592
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
A1Q1_01592
U7-dependent histone pre-mRNA processing factors
A1Q1_01592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
25985106
NCBI-ProteinID:
XP_014180106
UniProt:
J6F269
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MITLTPLSSSATSVSPDEPVSYFLELDDARILLDMGQRDYRASAQQTSWEYEEKIRDPTQ
YLGLYAYARAHWGLKCPVYATQPTVEMGRVVSLAEAESWRAECPVSDEEGEFKGPFVPTT
EEIHEAFDHIKAIRYNQPLHLGGELSHLLLTPFPSGHVLGGTLFKIRSPTSGTVLYAVGI
NHTGERHLDGMVTGQGGLQGYAEDIRRPDLLIVEGGRSNAVNAKRRERETAILDLVTATL
AGGRSVLMPCDASPRLLELLVLLDQHWSFKRTAAPGGPAAQWNHPLCLVSRTAQDMVSFA
RSLLEWMGGVVRESGADDVVAALDRRKGRKRKALVNLGSEYGALDFSHVQFFATPEELLE
KYPANRPKLVLAIPPTMSHGPSRTLFASMASVPGNVVLLTGHGEDRTLARELYARWEAHQ
DEGAHYGHGKIGHATPMEGRLELELDAKEPLSGEELEAYETAEREKREREAAHQAALERN
NRMLEADDLESDSDSDSEAGDLAGLHQEGANAFAGDGEDARTMSFDIFVKGQSVLRGTRF
RMFPYIAKGRKVDSFGEGLDVGQWIRKGREIEEDGETEEVRAAKRRKAAEEEKAKQAPEP
PSKFVSSIVGVDLHASIAYIDMAGEHDGQAIRTIVTDLAPRKLVVVKSTTPASEALKAYF
AQTPKITHDAFYPGPYQPIQIGEHVQSYSLQLGDSMGRLLAGRLSRFEGYEIAMVQGKLA
YATGSTVPILESADVVLPPLQAEVKVEEEADAAAGKEKGTAHGGDTETDAEAKAEAAAEA
VGPAGEAVEEKAEAEEDSREAVTDAPATAATAETNADDEAAAEQTAVKAAADIEAAVKTE
PIEVEENADENIIDPAHSLAAREAQAPPSGPLTLPSSLFIGDLRLLALKNRLGTLGIPAQ
FAGEGVLVCGPGVEPGAKGSIVAVRKLEEGRVVLEGPVSGTYFAVRRELYGSYAQVAA
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgctgacaccgctctcgtcctcggcgacatcggtatcgccggacgagccggtg
tcctacttcctcgagctcgacgatgcgcggatattgctggacatgggacaacgcgattac
cgtgcatcggcacagcagacgtcctgggagtacgaggagaagattcgggacccgacacag
tacctcgggctttacgcttatgctcgtgcacattggggtctcaaatgtcccgtctacgct
acgcagccgacggtagagatgggccgagtcgtgagcctggccgaggctgagagctggcgt
gccgagtgccccgtctcggacgaggaaggcgagtttaagggccccttcgtgcccacaaca
gaggagatccacgaggcgttcgaccacatcaaggcgatccggtacaaccagccattgcat
ctcggcggcgagcttagccacctgctcttgacgccgttcccctccggacatgtgctggga
ggcacactgttcaagatccgttccccgacgagcggtaccgtgctctacgcagtcggtatc
aaccatacgggagagcgccatctcgacggaatggtcacgggccagggcggtctgcaagga
tacgcagaggacattcgacgaccagacctgctcatcgttgagggaggaaggagcaacgcc
gtcaacgccaagcgaagagaacgcgagaccgccatcctcgacctcgtcactgcgacgctg
gcgggcggacgatcagtgctcatgccgtgtgacgcgagcccgcgtctgctcgagctgctc
gtcctgctcgaccagcactggagcttcaagcgaacagcggctccgggcggaccggcagcg
cagtggaaccacccgctctgccttgtcagccggacagcgcaggacatggtgtcgtttgcg
cgctcgctgttggagtggatgggcggtgttgtgcgtgaaagcggagccgacgacgtcgtt
gccgccctcgaccggagaaagggccgcaagcgcaaggcgctcgtgaatcttggctcggag
tacggagcactggacttcagccacgtacagttcttcgcgacgcccgaagagctgctcgag
aagtaccccgcgaaccgaccaaaactcgttctcgcgatcccgccgactatgtcgcatggc
ccgtctcgcacgctgttcgcatccatggccagcgttccgggcaatgtcgtcctgctgacg
ggacacggagaggaccggactctggcgcgcgagctctacgcacgctgggaagcgcaccag
gatgagggtgcgcactacggacacggcaagatcggccatgccacgccgatggagggtcgt
cttgagctcgagttggacgccaaggagccgctctctggcgaggagctggaggcgtacgag
actgccgagcgggagaagcgcgagcgcgaggcggcgcaccaggccgccctggagcggaac
aaccgcatgctcgaggccgacgatctggagagcgactcggattctgactctgaggcgggc
gacctggccggtctgcaccaggagggcgcgaacgcttttgccggcgacggcgaggatgca
cggacaatgtccttcgacatcttcgtcaagggccagagcgtgttgcgcggaacgcgcttc
cgtatgttcccctacattgccaagggacgcaaggtcgattccttcggcgagggtctggac
gtcggtcagtggattcgcaagggccgcgagatcgaggaagacggcgagacggaggaggtc
cgcgcggcgaagcgccgcaaggccgccgaggaggagaaggcgaagcaagccccggagccg
ccgagcaagtttgtctcgtccatcgtcggcgtggacctgcacgcgagcatcgcctacatc
gacatggcaggcgagcacgacgggcaagcgattcgcaccatcgtaaccgacctggcgccg
cgaaagctcgtcgttgtgaaatccacgacccccgcatccgaggcgctgaaggcgtacttt
gcgcagacgcccaagattacgcacgacgcgttctaccccggcccgtaccagccgatccag
attggagagcacgtgcagtcgtacagtctgcagctgggcgacagtatgggccgcctgctc
gcgggccgcctgagccggttcgaggggtacgagattgccatggtgcagggcaagctggcc
tacgctaccggctcgacggtgcccatcctcgagtcggccgatgtcgtcctgcccccgctc
caggccgaggtcaaggtcgaggaagaggcggacgcggccgccggcaaggaaaagggtacg
gcgcacgggggcgacacggagacggacgccgaagccaaggccgaggcggccgctgaggcc
gtgggacccgccggcgaggcggtcgaggagaaggcagaggcggaggaggactcgcgggag
gccgtgacggatgcgccggcgacggcagcgacggccgagacgaatgcggacgacgaggct
gcagcggagcaaactgccgtcaaggcggccgcggacattgaagctgcggtgaagactgag
cctatcgaggtcgaggagaacgcagacgaaaacatcatcgacccggcccactcgctcgcg
gcccgtgaagcccaggctcccccaagtggcccgctcacgctcccgagttcactgttcatc
ggcgacctgcgcctgctcgcgctcaagaaccggctcggcacgctcggcatcccggcccag
ttcgcgggtgagggtgtcctcgtctgtggacctggcgtcgagcccggcgccaaggggagt
attgtggctgtccggaagttggaggagggccgcgtcgtgctcgagggcccggtcagtggc
acgtactttgcagtcaggcgggaactgtacgggagctatgcgcaggtggcggcgtga
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