Trichosporon asahii var. asahii: A1Q1_01932
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Entry
A1Q1_01932 CDS
T06566
Name
(RefSeq) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tasa
Trichosporon asahii var. asahii
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tasa03016
]
A1Q1_01932
Enzymes [BR:
tasa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
A1Q1_01932
Transfer RNA biogenesis [BR:
tasa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A1Q1_01932
Prokaryotic type
A1Q1_01932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
Nbas_N
Motif
Other DBs
NCBI-GeneID:
25985446
NCBI-ProteinID:
XP_014180415
UniProt:
J5T3Y7
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MSAPSEPQVEACKRRLEEEMDERSPKRVKDGDSPDPPQFLTSFPSDAVPAVSRLGLKPTL
PVMPPSLDIITDGKTDLSHRRGFIGEREVGIIGYAGDSDFTGVNGVIKQRFSCQRDLSIW
TDVMASSSNDSKSLSTSGADTEVPKKEEDRGAAGEDAVVASLPADLNFEEHADWTTSTTI
GLRPHFSDETIVALRRLFDEGRNPQPRQDSGWGSREKQRTEQMNEEEQAMNVGSGPQPSQ
GRGRGNGRGGAPNSNPYKAKDAREVVTQSARGAAHQAVRELLKGNFESTARDIGGKGQCL
VLKWAASRSGGRDRKLCGTKDKRAITVQRVSLKRGSLTTQQVWRAVNGVRSGRRTEDGAV
AERGERGTRIGDMEYSTHPLELGSLKGNHNVQAAVEDIDKAMKSIRDKGFINFYGMQRFG
TSTVPTHVTGLLLLQGKWGEAIDSILSLREGEHPDCTRGRLAWLEDGDFSRALELMPRRS
VAERSIWEHWRKGNRLEDKVGALGNSYIWNLMAAERMKLSNDQPLEGDLVYEHDAGDDDA
DNKETSSRDVKRLTSADLGQYTLADVILPLPGWNIEYPGGRIGQLYKDALLADGLDPLRL
RRDQREYSLPGSYRRLIRKPTDVSWEHIRYTDPTLPLAQADEDRILNLNPPAADDPNGKF
RALKITWSLGTASYATMALRELTREETAIWHQIGLTMNNEDQAHAGDGGKSEHPSRLERL
VAANLETPAKTARDRPTGLHCERYVLSWASLTTDPFLETLVTRLYPDPRLPPSTLHLPSL
SSPTGQDRDFDPALVVAFNRSAKLLTASDASRSGNKRLLAIGGEEGAIKIIDVDALEPHD
SKWWSAHQNGIFDISWCDDDRHLSLRLHDVSGAGPRLLASLHGHTSTIKSTALLHESSSN
VIVSGGRDGNINVYDLRCRGYTSTREENGPSLRRSSRTRSTTQISSTGQSSIDPVLTLRQ
PHNATVGKRTTADSVSWQTPPVANAQRSVARTITSLVALRAQPGILASGGSYDGIVKLWD
IRCPEPTTALRFKSAPYGSLPDPTVAGGNPSRRPRSVNALCEQPSTGDLFVLCGDSKVHV
LRPSWAKATSSDRSEAILPQKFVHPMLVTRSFYIRMALSPDGRRLACGSSTGGVMMWDVD
RYPQNGEQTEATRLEIPHTTPEAPEVIALDWGKDMIAASSDDCATRIWQSNPVVSSQLML
KGQVREEWSGVDGSGQTVED
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccccatccgaacctcaagtcgaagcctgcaagaggcggcttgaagaggagatg
gacgagcgctcgccgaaacgcgtcaaggacggggattctccagaccctcctcagtttctg
acgagcttcccaagtgatgctgttccggccgtctcccgcttgggcttgaagccgacgctt
cccgtgatgcctccttcactcgatatcattaccgatggcaagactgacctgtcacacagg
agagggttcattggagagcgcgaggtcgggatcatcggttacgctggggactctgacttc
actggcgtcaatggagtgatcaagcaacgattttcttgtcaacgagatctctctatctgg
acagacgtcatggcctcatcctccaacgacagcaagtctttatcaacgtctggggcggac
actgaagtcccgaagaaggaggaggacagaggcgcggcgggtgaagacgctgtcgtagct
tcccttcccgccgatctgaacttcgaagaacatgcggattggacgacgtcgacaactatt
ggccttcgtccgcatttctcggacgagaccatcgttgctctccgccgtctgtttgacgag
ggtcgcaacccccaacctcgccaagactcgggctggggatcccgggagaagcagcgcacc
gaacagatgaacgaagaggagcaggctatgaatgtcgggtctggtcctcaaccttcccag
ggtagagggcgtggaaacgggcggggtggagcacctaacagcaacccatataaagccaag
gacgcgagggaggtcgttacgcagtcggcacgaggagcagcccaccaagcggtccgcgag
ttgttgaaaggaaactttgaaagcacagctcgggacattggcggcaagggccagtgtctt
gtcctgaaatgggctgcgagccgctcgggaggccgtgaccgcaagctatgcggcaccaag
gataaacgtgccattactgtccagcgcgtctctctgaaacgcggatccttgaccacgcag
caagtatggcgagcggtcaacggagtaagatctggccggagaactgaggatggggccgtc
gcagaacgcggcgagcgtggtactcgaatcggggatatggaatattctactcatcctctg
gaactcggttctctcaagggcaaccataacgtgcaagctgcggtcgaagacatcgacaaa
gccatgaagtctatccgcgataaaggtttcatcaacttttacggaatgcaacgcttcggc
acctcgactgtcccaacccatgtcaccgggcttttgctactgcagggcaagtggggagaa
gcgatcgactccatcctctcgttgcgagaaggagagcaccctgattgtaccagagggcgc
ctggcttggctggaggatggcgacttcagcagggctctggaactcatgccccgtcgatcg
gtcgctgagcggtcaatttgggagcattggcgcaagggaaaccgtctcgaggacaaagtg
ggggcactgggaaacagttacatctggaacctcatggccgcggagcggatgaagctctcg
aacgatcaacctctcgagggcgatcttgtgtacgaacacgacgcgggcgacgacgacgcc
gacaacaaggagacttcatcgcgtgatgtcaagcgtttgacctcggcagacttgggtcag
tatacactcgcggacgtcatcctcccactgccaggttggaacatcgagtatccaggcggt
cgcattggtcagctctacaaagacgctctcctcgccgacggtttggatcctctgcggctg
cggcgcgaccaaagggagtactcattgcctgggtcgtaccgacgcctgattcgcaagccc
accgatgtctcttgggaacacattcgttatacagaccccaccctgccgctggcgcaagcc
gacgaggacagaatccttaatctgaaccccccagcggcagatgacccgaatggcaaattc
cgcgccctgaagattacctggtctttgggcacagcatcttacgctaccatggccttgcgt
gagctcacgcgcgaagaaactgccatctggcatcagatcggtctgacgatgaataacgag
gaccaggcccatgcaggagacggaggcaagagcgagcatcccagccgccttgaacgtctc
gttgccgccaacctggagacgcccgcgaaaacggctagggaccggcctacggggttacac
tgcgagaggtatgtcttgagctgggcaagcctgacgacagacccgttcctggagaccttg
gtgacccgcctttaccccgacccccgcttacccccatcgactttgcatcttccctcgtta
agtagcccaactggtcaagacagagattttgatcctgcactggtcgtcgccttcaacagg
agtgctaagcttctgacagcaagcgacgcctcgcgctctggaaacaagcgtcttctggct
attgggggggaagagggagccatcaagatcattgatgtggacgccctggagccgcacgac
tcgaaatggtggtccgctcaccagaacggaatattcgatatctcgtggtgtgatgatgat
cggcacctttcattgcgcttgcatgatgtttctggagcaggtccgaggcttttggcctcc
cttcacgggcacacctcaaccatcaagtctacggctcttctgcacgagtcttcttcaaat
gttatcgtttctggtggtcgggatggcaacatcaatgtgtatgatctgcgctgtcggggc
tacacgtcaacccgcgaagagaatggcccatctctccgccgctcgtcccgcacaagatcc
accacgcagataagttcgacgggccagtcatcaatcgatccagttttgacactgcgtcaa
ccgcataacgcgacagttggcaaacggacgacagctgactcggttagttggcaaacccca
cctgtagctaatgcacagcgatcggtcgctcggactatcacgagtctcgttgcactccgt
gcccagcccggaatacttgcttccggagggtcctacgatggcatcgtcaagctgtgggat
atcaggtgccccgaacccaccactgctctacgcttcaagtccgcgccgtacggctctctc
ccggatcccaccgtcgcggggggcaacccctcccgtcgccctcgatcagtgaacgctctt
tgcgagcagccatctaccggcgaccttttcgtgttatgcggagactcaaaagtgcacgtc
ttgcggccatcttgggccaaggcaacctcgagcgatcgctctgaagccatcttgccccag
aagtttgtgcatccgatgttagtgactcgttctttctatataagaatggcgctgtcaccg
gacggacgacgcctagcctgtggctcatcaacgggaggcgtcatgatgtgggatgttgac
cgttacccgcagaacggcgagcagactgaagccacccgtttagagatccctcacaccacc
ccggaggcgcctgaggtgattgccttagattggggaaaggacatgattgcagcttcgtct
gacgactgcgccactcgaatttggcagtctaatccagttgtttccagccagctcatgctc
aagggccaggtcagggaagagtggagcggggttgacggttcgggccagaccgtcgaggat
tag
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