Trichosporon asahii var. asahii: A1Q1_01963
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Entry
A1Q1_01963 CDS
T06566
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03020
RNA polymerase
tasa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A1Q1_01963
09124 Replication and repair
03420 Nucleotide excision repair
A1Q1_01963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasa03021
]
A1Q1_01963
03400 DNA repair and recombination proteins [BR:
tasa03400
]
A1Q1_01963
Enzymes [BR:
tasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A1Q1_01963
Transcription machinery [BR:
tasa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
A1Q1_01963
DNA repair and recombination proteins [BR:
tasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
A1Q1_01963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Intein_splicing
MRNIP
LAGLIDADG_3
ATP-gua_PtransN
Motif
Other DBs
NCBI-GeneID:
25985477
NCBI-ProteinID:
XP_014180446
UniProt:
J6EWH7
LinkDB
All DBs
Position
Unknown
AA seq
1732 aa
AA seq
DB search
MDGGDGFEYKPDYQYDEEQNGENGVGEEEPISQEDYWKVINSFFDEKGLVRQQLESFNEF
VENTMQELVDENQRLTLDQHTQHTGVMGDETRRYEITFGQIYLAKVAMTEMDGQTVGLFP
QEARLRNLTYAAPLYVDMKKSTLSAGDVDDPIEADWKPAVDANGVMQGAEEDKIWIGKVP
VMVRSNFCLLHGLPDDHFYALNECPYDQGGYFIINGSEKVLIAQERMAANTVYVFKKADP
SPVIYLSEVTSQMEKGGKTPSKTVVKMYLRAQDKATTGSVIRVQLPYTKTDIPIVIVFRA
LGIVPDRDVLSHICFNPNDTAMLEMLRPCIEEAFSIQDRDTALDFIGRRGQQEKGTRASR
KAFFLGYMIHRLCSAALGRRELDDRDHFGKKRLDLAGPLLANLFRILFKKLTRDVYRHLQ
KCVETHKEFTLVNAIKPGIITNGLKYSLATGNWGDQAKAMQARAGVSQVLNRYTFASTLS
HLRRTNTPIGRDGKIAKPRQLHNTHWGLICPAETPEGQACGLVKNLALMSYISVGSYSAP
VMEFLEEWGLEPQDEYGSAPNATKVFVNGVWMGIHRDAVKLHENLLEMRRGGQLKHEVSI
VRDIRERELRLYTDAGRVCRPLFIVDRPTQTLRLKREHIDRLENIADGLEEAVDGSAWDE
LLYQGVIEYVDAEEEETILIAMTSEDLENARMYESPQEVARAQAAHTLEAFDPTARVKSS
SWSQNYTHMEIHPSMILGVCASIVPFPDHNQSPRNTYQSAMGKQAMGIHLTNYQLRMDTM
ANILYYPQSPLATTQSMKYLKFSDLPAGQNAIVAILCYSGYNQEDSVIMNQSSIDRGLFR
SLYYRAYTDTEKMVGMQKVESFEKPDRNETLRMKHGSSDRYAKLDNDGLITPATNVNGDD
IIIGKTAPIPPDSEELGQRSATHTKRDVSTPMKSTEQGVVDQVMITTNADGLKFVKIRIR
STRVPQIGDKFASRHGQKGTIGITYRQEDMPFTAEGITPDIIINPHAIPSRMTIGHLVEC
LLSKLATLTGREGDATPFTELTVESVSKLLRQRGYQSRGLEVMYHGHTGKKLRAQVYFGP
TYYQRLKHMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMERDCLHGDTRVTLASG
VSMRIKDLASLPEVLSHKVSTTTDRESYVPVQPTAHLPRPELKECIRLLFSDASSIVCTP
EHQIMTGDGQWMAAKDLVPGKTKVKRGPDAPLYLPEDDSPAHVAAFKLSLPSVNRTLEMD
STENIAAVHAFARILGYFLAKGSMSFNEEENRYSGSIMFNHIVDAEQGVADLEAAIGYKC
KIRPPSADYDCYLVDLPTDLLRDYHMVVGLEPGERVCQPASWPSFIMDSNCPVSVLREFL
GGLFGGDGIAPLPRDDSWHSVAFTSSKVDAHRESLIQSFDDLAMLLARCGVSGAVRQKLT
DCTNKGVLVLDGLLTIPMTQICAFAEKIGFRLCCDKQQRISVAASYYRSREYSLEQRRRY
IQRVETLTGYKSATEAEGKKGGKLKMTVDQAVAAVSKEFKDELFIDRLLATPSCQAVEDA
FKGVSNPDEAGKEFETDVPKWLKDHGAEGFFQSSTDSAYSASRDLNGFPVWNATFMGSED
AGSHLTYDISVPGSNSFLANSIQVHNCMISHGIAGFLKERMYESSDAFRLHVCDQCGLMA
VANLKKQEFHCSVCRNSTQISQIYIPYAAKLLFQELQAMNVTVRMYSDEDDA
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggtgacggcttcgagtataaacccgactaccagtacgatgaggagcaaaat
ggcgagaacggcgtcggggaggaggagcccatctcccaggaggactactggaaggtgatc
aactccttcttcgacgagaagggtcttgtccggcagcagctcgagtccttcaacgagttc
gtcgagaacacgatgcaggagctcgtcgatgagaatcagcggttgacgctggatcagcac
acccagcacactggcgtcatgggagatgagacgcgtcggtacgagatcacctttggtcag
atctacctcgccaaggtcgccatgacggagatggacggtcagacggtcggactgttcccg
caagaggcccgcttgcgtaatctcacctatgccgccccgctctacgtcgacatgaagaag
tcgacgttgtccgccggcgacgtcgacgacccgatcgaggccgactggaagccggcggtc
gacgctaacggtgtcatgcaaggagcggaggaggacaagatctggattggaaaggtgccc
gtcatggtccgctccaacttctgtcttcttcatggcctgccggacgaccacttctacgcc
ctgaacgagtgcccctacgaccagggaggatactttatcatcaacggttccgagaaggtg
ctcatcgcccaggagcgcatggcagccaatacggtgtacgtcttcaagaaggcggacccg
tcacccgtcatctatctctccgaggtcacgtcgcagatggagaagggaggcaagacgccc
tcgaagacggtcgtcaagatgtacctgcgtgcccaggacaaggcgacgacgggatcggtc
atccgtgttcagctcccctacaccaagaccgacattcccattgtcatcgttttccgtgcg
ctcggtattgttcccgaccgcgacgtgctgtcgcacatctgtttcaacccgaacgacacg
gccatgcttgagatgctccgaccatgtatcgaggaggcgttctcgatccaagaccgcgac
actgcgctcgacttcatcggtcgtcgtggacagcaggagaagggaacgagggcgtccagg
aaggcgttcttcctcggatacatgattcaccgactgtgttccgctgctctgggacgaaga
gagctcgacgaccgtgaccactttggaaagaagcgtctcgacctcgccggcccgctgctc
gccaacctgttccgcattttgttcaagaagcttacgagggatgtgtaccgtcacctgcag
aagtgtgttgagacgcacaaggagtttacgctggtcaacgccatcaagcccggaatcatc
acgaacggtctcaagtactcgctcgcgacgggtaactggggtgaccaggccaaggccatg
caggcgcgtgctggtgtgtcgcaggtgcttaaccgctacaccttcgcatccaccctctcc
catcttcgacgaacaaacaccccgatcggtcgtgacggaaagatcgccaagccgcgacag
ctgcacaacacgcactggggtcttatctgtcccgccgagacgcccgaaggacaggcgtgt
ggtctcgtcaagaacctggcgctcatgtcttacatctccgtcggatcgtactcggcgccc
gtcatggagttcctcgaggagtggggtctggagccgcaagacgagtacggcagcgcgccg
aacgcgaccaaggtgttcgtgaacggtgtctggatgggtatccaccgtgatgccgtcaag
ctgcacgagaacctcctggagatgcgtcgtggaggacagctaaagcacgaggtgtcgatt
gtgcgcgacattcgtgagcgagaactccgcttgtacaccgacgctggtcgtgtctgtcgc
ccgctgttcattgtcgaccggccaacgcagacgctgcgcctcaagcgtgagcacattgac
cgcctcgagaacattgccgacggtctggaggaggctgtggacggatccgcctgggacgag
ctgctctaccagggtgtgatcgagtacgtcgatgccgaggaggaggagacgatcctgatt
gcgatgacgtcggaggacctggagaacgcgcgcatgtacgagtcgccgcaagaagttgcg
cgtgcccaggccgcgcacacgcttgaggcgttcgacccgacggcgcgtgtcaagagttcc
agctggtcgcagaactacacgcatatggagattcacccaagtatgattctcggtgtctgt
gcctcgatcgttccgttccccgaccacaaccagtcgccgcgtaacacctaccagtcggcg
atgggtaagcaagccatgggcattcacctcacgaactaccagctgcgaatggacacgatg
gcgaacatcctctactacccgcagtctcctctcgcgactacgcagtcgatgaagtacctc
aagttcagcgacctgcctgccggacagaatgccattgtcgctattctgtgttactcgggt
tacaaccaggaagactcggttattatgaaccagtcctcaattgaccgaggtctcttccgc
tcgctctactaccgtgcctacaccgacacggagaagatggtcggtatgcagaaggtcgag
tcgttcgagaagccggaccgcaacgagacgctgcgcatgaagcacggctcgagcgaccgc
tacgccaagctcgacaatgacggtctcatcacccccgcgaccaacgtcaacggtgacgac
attatcattggaaagacggcgcccatcccccctgacagcgaggagctgggtcagcgatca
gcgacccacaccaagcgtgacgtctcgacgccgatgaagagcaccgagcagggtgtcgtc
gatcaggtcatgatcaccacaaacgctgacggcctcaagttcgtcaagatccgtatccgc
tcgacgcgtgtgccgcagattggtgacaagtttgcgtctcgtcacggtcagaagggtacg
atcggtatcacgtaccgccaggaggacatgccgttcacggccgagggcatcacgcccgac
attattatcaacccgcacgccattccgtcgcgtatgacaatcggacacttggtcgagtgt
ctgctgtccaagctcgcgacgctgacgggtcgcgagggtgacgccacgccgttcacggag
ctgactgtcgagtccgtgtccaagctcctgcgccagcgaggctaccagtcgcgcggtctc
gaggtcatgtaccatggacacacgggcaagaagctccgtgcccaggtctactttggcccc
acgtactaccagcgtctcaagcatatggtcgacgacaagattcacgcccgtgcccgtgga
ccgctgcagattctgacgcgtcagcccgtcgagggtcgttcgcgtgacggtggtctccgt
ttcggtgagatggagcgcgattgtcttcatggcgacacgcgcgttacgctggcatcgggc
gtctcgatgcgtatcaaggacctggcgagcttgccggaggtgctgtcgcacaaggtttcg
accaccaccgaccgagagtcttacgtccctgtgcaaccgactgcgcatctcccgcgtccc
gagctcaaggagtgcatccgtctgctcttcagcgatgcgtcaagcatcgtgtgcacacct
gagcaccagatcatgactggcgacgggcagtggatggcagcgaaggatcttgtgcctggg
aagaccaaggtcaagaggggccctgacgcaccgctctacctgcccgaggacgacagcccg
gcgcatgtggctgccttcaagctgtcgcttccaagcgtcaaccgcacccttgagatggac
tcgaccgagaatattgccgccgtgcatgccttcgcgcgcatcctcggctacttcttggct
aagggctccatgagcttcaacgaggaggaaaaccgttactctggctctatcatgttcaac
cacatcgtggacgctgaacagggtgttgctgatttggaagctgcgatcggctacaagtgc
aagatccgaccgccgtctgcagactatgactgctatctggtcgatcttcctacggatctc
cttcgcgattaccacatggtcgtcggcttggagcctggggagcgcgtctgccagcccgcg
tcgtggccctccttcatcatggactccaactgcccagtctccgtgctccgtgaattcctc
ggtggcctcttcggcggcgacggcattgcgccgctccctcgcgatgattcctggcattcc
gttgccttcacgtctagcaaggtcgacgcccatcgcgagtcgcttatccagagcttcgac
gatctggccatgcttctcgctcgttgcggcgtttctggtgcagtccgccagaaacttaca
gattgcaccaacaagggtgtgcttgttcttgatggccttttgaccattcctatgacgcag
atctgcgcctttgctgagaagattggattccgtctctgctgtgacaagcagcagcggatc
tctgtcgccgccagctactaccgttcgcgcgagtacagcttggagcagcgccgccgctac
atccagcgcgtcgaaaccctcacgggctacaagtctgcgaccgaggcggaaggcaagaag
ggtggcaaactgaagatgactgtggaccaggctgttgccgccgtttccaaggagttcaag
gacgaactgttcattgatcgcttactcgccaccccgtcctgccaagccgtggaggatgcc
ttcaagggtgtgtcaaacccggacgaggcgggtaaggagtttgagacggacgttccgaag
tggctgaaggaccacggcgcggagggcttcttccagtcctcgaccgactccgcgtactct
gcgtcccgcgatctcaatggcttccccgtgtggaatgcgacttttatgggcagcgaggat
gcgggctctcacctcacgtacgacatctctgtcccgggatccaacagcttcctcgccaac
tccatccaagtgcacaactgtatgatctctcacggtatcgccggtttcctcaaggagagg
atgtacgagtcgtctgacgcgttccgactgcacgtctgcgaccagtgcggtctcatggct
gtggccaacctgaagaagcaagagttccactgctcggtgtgccgtaacagcacgcagatc
agtcaaatctacattccctacgctgccaagcttcttttccaggagctccaggcgatgaac
gtgaccgtgcgcatgtactcggacgaggacgacgcgtaa
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integrated database retrieval system
