Trichosporon asahii var. asahii: A1Q1_02110
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Entry
A1Q1_02110 CDS
T06566
Name
(RefSeq) ATP-dependent RNA helicase
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03013
Nucleocytoplasmic transport
tasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
A1Q1_02110
03015 mRNA surveillance pathway
A1Q1_02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_02110
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A1Q1_02110
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
A1Q1_02110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
25985624
NCBI-ProteinID:
XP_014184115
UniProt:
J4ULD1
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSGHTPSKSWADVEDDDDLGSDLASRLGGFAKADSPAPDSKPVPEAQSLASRIGGLATDD
NDEKDSKPSSSEKPRPSVNKSNPLLGKALAGANADRSSPSASSGQKKEDTPKDKMNGPDD
GEPLSPSATDISNDFQVEVKLADQQADPNSPLYSVKSFEELPIHDDLKKGIYAMNYTKPS
KIQEKALPLLLANPQSGTGKTAAFSLAMLSRVDAALCTPQAICLAPSRELARQTVDVIEK
LAQFTEIKVKLVVPGSWSRSQKITEQIVVGTPGTLVDILSRGGRILDHSQIRVVVVDEAD
ELLALQGLGDQTMRIKKMIPGKPQMMLFSATFPDQVQEYAELFCPQANSIYLKKEEVTVD
AIKQLKVECANEEDKFDVLALLYDVMTIGQSMVFCKKKVTADQISERLESDGHSVACLHG
DKMSDERDKILDDFRQGKTKVLITTNVVARGIDIQQVNMVVNYDVPIMGPDEGWAPDIET
YIHRIGRTGRFGRKGCAVTFIDGERSGADVKAIEDALGKPMKQIDARNKDDLDQLEQVLK
AALKDPK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccacactccatccaaaagctgggcagacgtcgaggacgacgacgacctcgga
tctgatcttgcatcccgtcttggtggcttcgccaaggcagactcaccagcacccgactcg
aagcccgtcccggaagctcagtcgctagcctctcgcattggcggcctcgctaccgacgac
aacgacgagaaggactccaagccttcatcatctgagaagccgcgccctagtgttaacaag
tcgaacccgctgctcggaaaagccctcgctggagctaacgccgaccgctcgtctccatca
gcctcctccggacagaaaaaggaagacacaccgaaagacaagatgaacggacctgacgat
ggtgagccgctctctccgtccgcaactgacatcagcaacgacttccaggtcgaggtcaag
ctcgccgaccagcaggccgaccccaactcgccactctactctgtcaagtctttcgaggag
cttcctattcacgacgacctcaagaaaggtatctacgccatgaattacaccaagccctcg
aagatccaggagaaggcccttcctcttcttctcgccaaccctcagtcgggtaccggcaag
actgccgccttctctctcgccatgctctcccgcgtcgatgctgccctctgcactcctcag
gcgatctgtcttgctccgtcccgtgagctggcccgtcagactgtcgacgtcattgagaag
ctggcgcagttcaccgagatcaaggtcaagctcgtcgttccgggctcctggtcgcgctcc
cagaagattacggagcagattgtcgttggaacccctggaaccctggttgatatcctgtcc
cgcggcggacgcatcttggatcactcccagatccgtgtagtcgtcgtcgatgaggccgat
gagctgctcgctctccagggtcttggcgaccagactatgcgtatcaagaagatgattccc
ggcaagccccagatgatgctgttctccgcgaccttccccgaccaggtccaggagtatgcc
gagctcttctgtccccaggccaactcgatctacctcaagaaggaggaggttaccgtcgac
gccatcaagcagctgaaggtcgagtgcgcgaacgaggaggacaagttcgatgttctcgcc
cttctctacgacgtcatgaccatcggtcagagcatggtcttctgcaagaagaaggtcacc
gcggaccagatctcggagcgcctcgagagcgacggccactcggttgcctgtctccacggt
gacaagatgtcggacgagcgtgacaagatcctcgacgacttccgtcagggcaagaccaag
gtcctcatcacgaccaacgtcgtggctcgcggtatcgatatccagcaggttaacatggtc
gtcaactacgacgtccccatcatgggccccgatgagggctgggcgcctgatatcgagact
tacatccaccgcattggtcgtaccggtcgtttcggccgcaagggttgtgcggtcactttc
atcgacggcgagcggtcgggagccgatgttaaggccatcgaggatgctctcggcaagccc
atgaagcagatcgacgctcgcaacaaggacgacctcgaccagctcgagcaggtcctcaag
gctgctctcaaggaccccaagtaa
DBGET
integrated database retrieval system
