Trichosporon asahii var. asahii: A1Q1_02985
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Entry
A1Q1_02985 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03013
Nucleocytoplasmic transport
tasa03015
mRNA surveillance pathway
tasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A1Q1_02985
09122 Translation
03013 Nucleocytoplasmic transport
A1Q1_02985
03015 mRNA surveillance pathway
A1Q1_02985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_02985
03041 Spliceosome [BR:
tasa03041
]
A1Q1_02985
03009 Ribosome biogenesis [BR:
tasa03009
]
A1Q1_02985
03012 Translation factors [BR:
tasa03012
]
A1Q1_02985
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A1Q1_02985
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
A1Q1_02985
mRNA cycle factors
Stress granule specific factors
A1Q1_02985
Spliceosome [BR:
tasa03041
]
Complex C
Other components
EJC/TREX
A1Q1_02985
Ribosome biogenesis [BR:
tasa03009
]
Eukaryotic type
90S particles
Helicases
A1Q1_02985
Translation factors [BR:
tasa03012
]
Eukaryotic type
Initiation factors
eIF-4
A1Q1_02985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
25986498
NCBI-ProteinID:
XP_014179689
UniProt:
J6EU33
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MALTSRGDDKLVFESSETVQVAPTFEALKLREDLLRDFEKPSAIQQRAILPIIRGRDVIA
QAQSGTGKTATFSISALQSLDLNNRDTQALILSPTRELAVQIQTVALALGDYMNVSCHAC
IGGTSVGEDIRKLEAGQQIVTGTPGRVFDMIRRRNLRTKDIKMLILDEADELLNKGFKDQ
IYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTEPVRILVKRDELTLEGIKQFFVAVEK
EDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKERDAIM
AEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRENYLHRIGRSGRFGRKGVAINF
VTVEDVHILRDIEVYYATQIDEMPMNIQAGVDVRVQTIKRDSIRSPAGHCHPTDSRMTPA
SKLRAQPQPEAYGRSFKPLRPLPHANQSKEEIRSAVHS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctctaacctccaggggagacgataagctcgtgttcgagtcctctgagactgtccaa
gttgcccctacgttcgaagccctcaaactccgtgaagacctcctccgtgacttcgagaag
ccgtcggcgatccagcagcgtgcgatcctgccgatcatccgcggccgagatgtcatcgcc
caggcccagtccggtacgggtaagacggcgacgttctcgatctctgcgctgcagtcgctc
gacctgaacaaccgtgacacgcaggctctgattctgtctccgacgcgtgagctggctgtt
cagatccagacggttgcgctcgcgctcggcgactacatgaacgtgtcgtgccacgcctgt
atcggaggcacgtctgtcggcgaggacattcgcaagctcgaggctggccagcagattgtg
acgggaacgccgggacgtgtgttcgacatgatccgccgccgaaacctgcgcacgaaggac
atcaagatgctgattctggacgaggcagacgagctgctgaacaagggattcaaggaccag
atctacgacatttaccgctacctgccgcccgcgacgcaggttgtggtcgtgagcgcgacg
ctgccgcacgacgtgctcgagatgacgaccaagttcatgaccgagcccgtccgcatcctt
gtcaagcgtgacgagctcacgctcgagggcatcaagcagttcttcgtggcggtcgagaag
gaggactggaagttcgacacgctgtgcgacctctacgacacgctcacgatcacccaggcc
gtcatcttctgcaacacgcgccgcaaggtcgactggctcacggagaagatgcgcgaggcc
aacttcaccgtgtcgtcgatgcacggcgagatggtgcagaaggagcgcgacgcgatcatg
gccgagttccgctcgggccagagccgcgtgctcatcacgaccgacgtgtgggcccgtggt
atcgacgtccagcaggtctcgctcgtcatcaactacgacctccccaacaaccgtgagaac
tacctgcaccgtatcggtcgctcgggccgtttcggacgcaagggtgtcgccatcaacttt
gtcaccgtcgaggacgtccacatcctccgcgacatcgaggtgtactacgcgacccagatc
gacgagatgcccatgaacattcaggcgggcgtcgatgtccgtgtgcagacgatcaaacgg
gactcgatccgctctcctgctggccattgtcatccgacggatagcaggatgacacccgcg
tccaagctcagagcccagccccagcctgaggcgtacgggcgtagcttcaagcctcttcgc
ccattgccacatgccaaccaatccaaggaggagatcagatcagcagttcattcttag
DBGET
integrated database retrieval system
