Trichosporon asahii var. asahii: A1Q1_03197
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Entry
A1Q1_03197 CDS
T06566
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A1Q1_03197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tasa03400
]
A1Q1_03197
DNA repair and recombination proteins [BR:
tasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
A1Q1_03197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
25986710
NCBI-ProteinID:
XP_014179125
UniProt:
J5SWE3
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MSALAALISYLELMMDTPMHGQFHLRRHDLSQFMKLDASAVKALNLMPQPELGGNKNMSL
YGLLNHCKTSQGQRLLGRWLKQPLVNRHAIQRRQDMVEMFVNDSVRRRTLQDEYLKRMPD
FHRICKRFHRGGAGLEDLVRVYQAVAVLPKIIDSLDDLAKEEGMQGQVLEEDFIVPLREK
ATQLEQYSALIEESIDLEELEHNHHYHLQPTLDPELQQFRDSLLATRDGLDEEHRRVGRK
LGLDIEKKLHLENNQVYNYSFRVTKAEANAIRQNQWCIELAVQKAGTIFTTEKLKELSAE
YLRLQEEYEKKQKYLIKEVVGVASSYAPLLEELDGTIAALDVLVSFAHVSANAPIPYVKP
TVAEKGGSDVIVRGARHPCLEVQDDINFIANDHEMRRGNSEFAILTGPNMGGKSTYIRQL
GVIALLAQLGCFVPADSAKLPIFDCVLARVGAGDSQLKGVSTFMAEMLETATILRSATRD
SLIIIDELGRGTSTYDGFGLAWAISEHIAKNIRAFCLFATHFHELTAMANQMEWVKNLQV
RAEVQPAPAGKSISDRQITLLYQVIEGHSDQSFGIHVAELARFPDAVVKLAKRKADELED
FGTEDDAAKMPKLDEGEVEQGTQIVKEFLAEWKGQSADGSEDEQRAALKALVEQWQDRFD
GNAWVKSVLSGL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctcgctgctctcatctcctatctcgagctcatgatggatacgcccatgcac
ggccagttccatctccgccgccacgacctgtctcagttcatgaagctggacgcctctgct
gtcaaggccctcaacctcatgcctcaaccggaactcggcggtaacaagaacatgagcttg
tacggcctgctgaaccactgcaagaccagtcagggccagcgtctgctcggtcgatggctg
aagcagccgctcgtcaaccgccacgcaatccagcgccgccaggacatggtcgagatgttt
gtcaacgacagcgtccgccgccgcacgcttcaggacgagtacctgaaacgcatgcccgac
ttccaccgtatctgcaagcgcttccaccgcggcggagctggacttgaggacctcgtgcgc
gtgtatcaggctgtcgctgttctgccgaagatcattgactcactcgacgaccttgccaag
gaggagggtatgcagggccaggtgctcgaggaagatttcattgtcccgctgcgtgagaag
gcgacgcagctggagcagtactcggcgctcatcgaggagtcgattgatcttgaggagctc
gaacacaaccaccactaccacctgcagccgacgctggaccccgagctgcagcagttccgc
gactcgcttctcgccacgcgcgacggactggacgaagaacaccgccgcgtcggacgcaag
ctcggcctcgacattgagaagaagctgcatctcgagaacaatcaggtctacaactactcg
ttccgtgtcaccaaggctgaggcgaatgcgattcggcaaaaccagtggtgcatcgagctc
gctgtccaaaaggcgggcacgatcttcacgacggagaagctcaaggagctcagcgctgag
tatctccgtctgcaggaggagtacgagaagaagcaaaagtatctcatcaaggaggtcgtg
ggcgtcgcgtcgtcgtacgccccgctgctcgaggagctggacggcacgattgcggcgctc
gatgtcctcgtcagctttgcgcacgttagtgccaatgcgccgatcccctacgttaagccg
accgtcgctgaaaagggcggctccgatgtgatcgttcgcggggcgcgccacccctgcctt
gaagtgcaggacgatatcaatttcatcgcgaacgaccacgaaatgaggcgcggcaacagc
gagttcgccatcctgactggaccaaacatgggcggcaagtcaacgtatattcgccagctg
ggtgtcattgctctccttgcacagctcggttgctttgtgccagccgacagtgccaagttg
ccgatcttcgactgcgtgcttgcgcgcgtgggagcgggcgattcgcagctcaaaggcgtt
tcgaccttcatggctgagatgctggaaaccgcgacgattctgcgaagcgctacgcgagac
tcgctcatcatcattgacgagctcggccgtggcacgagcacgtacgacggcttcggtctc
gcgtgggcgatctccgagcacatcgccaagaacatccgagccttctgcctgttcgccacg
cacttccacgagctgaccgcgatggcgaaccagatggaatgggtcaagaacctgcaagtg
cgggccgaggtccagccagctccggcaggcaagagcatctcggaccgccagatcacgctc
ctctaccaggtcatcgaggggcacagtgaccagagctttggtattcacgtcgccgagctg
gcgcgtttcccggacgcagtggtcaagctggcgaagcgcaaggctgacgagctcgaggac
tttggcaccgaggacgacgcggccaagatgcccaagctagacgagggtgaggtcgagcag
ggtacgcagattgtgaaggagttcctggccgagtggaagggtcagtcagccgacggaagc
gaggacgagcagcgtgctgccctcaaggcgctcgttgagcagtggcaggaccgcttcgac
ggcaacgcctgggttaagtctgtcctgagcggcctatag
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