Trichosporon asahii var. asahii: A1Q1_04054
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Entry
A1Q1_04054 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A1Q1_04054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasa03041
]
A1Q1_04054
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A1Q1_04054
Spliceosome [BR:
tasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
A1Q1_04054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
nSTAND_NTPase5
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
25987567
NCBI-ProteinID:
XP_014177906
UniProt:
J5SRV8
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MADLRQFIGDNLVRVSGAPSTSHAKLTSQLLGSADSAVTDFVHSAGKNKQAESSADMVAL
SAKTPGDLYNQLLAAGLSESPDTQAFATQVHGLVPRKTKTKKPKVAPTVNTQKFTFVTEE
EERISKKKKSKSKDKDREVASHKLERSSRKRDTEGNWDSDPEDLEPEPPKRARFDSPVRD
EEPPEPEETEEERLERERLEDLAERDAFAERMKNKDQDRTKKIVQDRSNEGTEEAARRQL
FAEDAEARREVMPDLRERSRQSYLQKREEQRLDLLKLEVEDEKILFRGQKLSKREIEEHE
RKIELIKILEERKKIDDGTDGYMLPEDYITEQGRLDSKKKKNALYQRYEERDKNKEAFAT
DVDTWEESQRYRTDFVTGALDKEVVDENDGYDYVFDESQGIQFLQEGGLDGTLNPEAEAL
LAQVEEAEKKHQSIQDTRKSLPVYEFRDELLEAIAEHQVLIVVAETGSGKTTQLPQYLHE
AGYTAGGMKVGCTQPRRVAAMSVAARVAEEVGCRLGQEVGYSIRFEDMTSDKTVLKYMTD
GMLLREFLTDPELSTYSALVIDEAHERTLSTDILFGLIKDIARFRPELKLLISSATLNAQ
KFSQFFDDAPIFDIPGRRFPVDMFYTQQPEANYIHAAVTTILQIHTTQPKGDILLFLTGQ
DEIEACEENLKETMYALGDKVPELIIAPIYANLPSEMQTKIFEPTPEGARKVVLATNIAE
TSITIDGVVYVIDPGFVKQNNYNPKTGMSSLVVEPISRASANQRAGRAGRVGPGKAFRLY
TKWAYKNELLEDTIPEIQRTNLGMVVLMLKSLGINDILNFEFLDKPPAETIIRSFEMLYA
LGALNHKGELTRLGRRMAEFPVDPMLSKAIINSENFKCTHEVLIIISMLQESGSLLYRPK
DKRVHADKAHKNFQKPGGDHFTLLNIFEQWAEAGYGQQFCYENFVQYKSLCRVRDIRDQL
ASLCDRVEVVIESCPNDVVPVQKAITAGYFYNTARLDKGGGYKTTKNNHTVYMHPSSGLI
GMQPPPRFILYYELVLTSKEYMRQCMPIEGEWLYELAPHYFNRGDVQKMMGSASSVKMPK
QIKPAPGPQDVK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcaggcagttcattggtgacaacctcgtgcgggtaagtggggcaccttct
acgtcgcacgcgaagctgacatcacagctgctcggctctgctgatagcgccgtcaccgat
ttcgtccactcagctggtaagaacaagcaggcagagtctagcgctgacatggtagctctc
tccgctaaaacacctggtgatctttacaaccagctgctggctgctggtctctccgagtcc
cccgacactcaagctttcgccacccaagttcacggcttggttcctcgaaagacgaagacg
aagaagccgaaggtcgcgccgacagtcaacactcagaagtttacgtttgtgaccgaggaa
gaggagcggatttcgaaaaagaagaagagcaagagcaaggataaggaccgtgaagtcgct
tcccataagcttgaacgatcatcaagaaagcgcgacaccgagggcaactgggattctgac
cccgaagacttagaaccagagccaccaaaacgtgcccgattcgattctcctgtccgtgat
gaggagccgccggagcctgaggagactgaggaggagcggttggagagggagcggttggaa
gatctcgcagagcgagatgcgttcgccgagcgcatgaagaacaaagatcaagatcggacg
aagaagatcgttcaagaccgatccaacgagggcacggaggaggctgctcgtcggcagctg
ttcgcagaggatgccgaggcgcggagagaggtcatgccggatcttcgagaacgctcccga
cagtcgtacctgcagaagcgtgaagagcagcgcttggacttgctcaagctcgaagtggag
gacgaaaagatcttgttccgaggacaaaagctgtcgaagagggaaatcgaggagcacgaa
cgcaagatcgagctcatcaagatcctcgaggagcgcaagaagatcgacgatggcacggac
ggctacatgctccctgaggactacatcacagagcagggtcgtctcgattcgaagaagaag
aagaacgccctgtatcagcgctacgaggaaagggacaaaaataaggaggctttcgcgacc
gacgtggatacctgggaggagtctcagcggtaccgcacggactttgtcactggagctcta
gacaaagaggtcgtcgacgagaacgatggctatgactacgttttcgatgagagtcagggt
atccagttcttgcaggagggcggtttggacggtacgctcaaccctgaggctgaagctttg
ctcgcccaggtcgaggaggcggagaagaagcaccagtccatccaggacacgcgaaagtcg
ctacctgtgtacgagttccgtgatgagctgttggaggccatcgctgagcatcaggtgctt
atcgttgtcgccgaaacaggttcgggcaagacgacccaacttcctcagtatttgcacgag
gccgggtacactgcaggcggcatgaaggtaggttgcacgcaaccgcgtcgtgtcgccgcc
atgtccgttgctgcccgtgtcgctgaagaagttggctgccgtctgggtcaagaagtcggc
tactcgatccgtttcgaggacatgactagcgacaagacggtgctcaagtatatgacggac
ggtatgctcctccgtgagttcttgacggaccccgagctctcaacgtattctgcgcttgtc
atcgacgaggcgcacgagcgaacactctccacggatattctcttcggactcatcaaggac
attgcccgattccgaccagagctgaagcttctgatctccagcgctactctcaatgcgcaa
aagttcagtcagttcttcgacgacgctcccatcttcgacattccaggccgccgcttcccc
gtcgacatgttctacactcagcagcctgaagccaactacattcacgctgccgtcacgacc
attctccagatccacacaacccaaccgaagggtgacatcctcttgttcctgacaggtcaa
gatgagatcgaggcttgcgaggagaatctcaaggagaccatgtacgctctcggcgacaag
gtgcctgagcttatcatcgcacctatctacgccaaccttccgagcgaaatgcagacgaag
atcttcgagccgacaccagaaggcgcgcgcaaagtcgtcttggccaccaacattgctgag
acgtcgattacaatcgatggcgtagtttatgtcatcgacccgggcttcgtcaagcagaat
aactacaatcccaaaacaggaatgtcgtcgctggtggtggagccaatctctcgcgcctct
gcgaatcagcgtgcgggtcgtgccggacgtgtcggacctggtaaggcgttcagactgtac
accaagtgggcgtacaagaatgaattgctggaggacacgataccagagatccaacgaacc
aacctcggcatggtcgtgctgatgctgaagtcgctcggcattaacgacatcctcaacttt
gagttcctggacaagccgccagccgagacgatcatccggtcgttcgaaatgctgtacgcg
ctcggagcgctcaaccacaagggcgagctgacccgtctcggtcgccgcatggccgagttc
cccgtcgacccgatgctctcgaaggcgatcatcaacagcgagaatttcaagtgcacgcac
gaggtgctcatcatcatttcgatgctgcaggagtcgggatcgctcctgtaccggccgaag
gacaagcgtgtgcatgccgacaaggcgcacaagaatttccagaagccaggaggcgaccac
ttcacgctgctcaacatcttcgagcagtgggctgaggcgggctatggccagcagttctgc
tatgagaacttcgtgcagtacaagtctctctgtcgcgtgcgtgacatccgcgatcagctg
gcgagtctttgcgaccgagttgaagttgtgatcgagagctgcccgaatgacgttgtcccc
gtccagaaggcgatcacggctggctacttctacaacactgcgcgcctcgacaagggtggt
ggctacaagaccacgaagaacaaccacaccgtctacatgcacccgtcgtcgggtctcatt
ggcatgcagcccccgccgcgcttcatcctgtactacgagctcgtccttacgagcaaggaa
tacatgcgccagtgcatgccgatcgagggagagtggctgtacgagctcgcgccgcattac
ttcaaccgcggcgacgtgcagaagatgatgggaagcgcgagcagcgtcaagatgccgaag
cagatcaagccggccccaggaccgcaggatgtgaagtag
DBGET
integrated database retrieval system
