Trichosporon asahii var. asahii: A1Q1_04111
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Entry
A1Q1_04111 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
tasa
Trichosporon asahii var. asahii
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tasa03016
]
A1Q1_04111
Enzymes [BR:
tasa01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
A1Q1_04111
Transfer RNA biogenesis [BR:
tasa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
A1Q1_04111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
TSEN34_N
CCDC47
Motif
Other DBs
NCBI-GeneID:
25987624
NCBI-ProteinID:
XP_014177963
UniProt:
J5QFR1
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MASAEAGPSSIPLYVINGVATVWDAQSVVQQNAFLGLPLTLMPEETTHLVESGVAHLVAV
PDKITPPSAEIVAERTAQRIARSRATAMHVRHEEAKAAAAAKAKYNKVDAAATAKREERA
RKKALKARDAAIAAGEDAAVAEETYQAALAAIGAPPAAPSAELDVDDSVPTAANSNFFTV
VPAAPVVSVEMEKSTSVPAPSFPFPVSLRDTAIASVFRKLHSNGLRMGLGPRFGGEYLVY
PGDFLRYHAHFTSQVVKNNEPIRPAELIAWGRLGTGTKKASLICCWNTDEKENAGPEDTE
FYSLEWANFG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgctgaagcagggccaagcagcatcccgctgtacgtcatcaacggcgttgca
acagtatgggacgcccagagtgttgtgcagcagaacgccttcctcggtctcccgcttacg
ctcatgccggaagagacgacgcatctggttgagagtggcgttgcgcacctcgtcgccgtc
ccggacaagattaccccgccttccgccgagattgtggccgagcgcaccgcacagcgtata
gcgcgctcgcgggctactgcaatgcacgtccggcacgaggaggccaaggcggctgcggca
gccaaggcgaagtacaacaaggtcgacgcggcggcaacggctaagcgcgaagagcgcgcg
cggaagaaggcgctgaaggctcgagacgcggccatcgccgctggagaagacgctgccgtt
gctgaggagacgtatcaggctgctcttgctgccatcggtgctccacctgctgcaccgagt
gcagagctcgatgtcgacgactctgtcccgactgctgcgaacagcaacttcttcaccgtc
gtgcctgctgcccctgtcgtgtcggttgagatggagaagagcacgagtgtacctgcgccg
tctttccccttccctgtatctctcagagatacggccatcgcgtccgtgttccgcaagctg
cactccaatggtttgcgtatgggtctcggaccgaggttcggaggagagtaccttgtctac
cctggtgacttcctccgataccatgcacacttcacgagccaggttgtcaagaacaacgag
ccaattcgtcccgcggagcttattgcctggggacgactgggaaccggaacgaagaaggcg
agcctcatctgttgctggaacacggacgagaaggagaacgctggccccgaggacaccgag
ttctactcccttgagtgggccaactttggatag
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