KEGG   Trichosporon asahii var. asahii: A1Q1_04179
Entry
A1Q1_04179        CDS       T06566                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
tasa  Trichosporon asahii var. asahii
Pathway
tasa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A1Q1_04179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tasa03019]
    A1Q1_04179
Messenger RNA biogenesis [BR:tasa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     A1Q1_04179
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     A1Q1_04179
SSDB
Motif
Pfam: EXOSC1 ECR1_N
Other DBs
NCBI-GeneID: 25987692
NCBI-ProteinID: XP_014178031
UniProt: J4U944
LinkDB
Position
Unknown
AA seq 211 aa
MSAPLLLPGQPLPAAFTIPPVPQCGPGCYESQGRILASIVGRPHRDGAVVSVIGKAEAGV
VPEIGSIVGYPLLVCAASSNTQIARLSPQQAHVVIQIVNDRPVADSTEELTGVVKMGECF
RLGDIVKAKVVSHALVLFCSSPQLSLGDARSYYLSTAANELGVVYATSEDGEHPPSQPVP
LTTRQPAPSHLVPGDGGPPDGPHRAAQGRQT
NT seq 636 nt   +upstreamnt  +downstreamnt
atgtccgcaccgctactcctcccgggacaaccgctaccagcagcattcacaatacctcca
gtgccgcagtgcggtccaggctgttatgagagccagggccgtattctcgccagcattgtc
gggcggccacaccgcgatggagcagtcgtcagcgtcattggcaaggccgaggcgggtgta
gtgccagaaatcgggagcattgttggttaccctctcctggtttgcgcggcgagctctaac
acccagattgcgcgcttgtcaccgcagcaggcgcacgtcgtgattcagatcgtcaacgac
cgccccgtcgccgactctacagaggagctgacaggcgtcgtcaagatgggcgagtgcttc
cgcctcggcgacattgtcaaggccaaggtcgtaagtcacgccctcgttctgttctgtagc
tcaccccagctctccctcggcgacgcccgcagctactacctctccacagccgccaacgag
ctcggtgtcgtgtacgccacctccgaggacggtgagcaccccccttcccagccagtaccg
ctgaccaccaggcaacccgctccttcccatctcgttccaggagatggaggacccccagac
gggccgcacagagcggcgcaaggtcgccaaacctga

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