Trichosporon asahii var. asahii: A1Q1_04179
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Entry
A1Q1_04179 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1Q1_04179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_04179
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
A1Q1_04179
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
A1Q1_04179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
25987692
NCBI-ProteinID:
XP_014178031
UniProt:
J4U944
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MSAPLLLPGQPLPAAFTIPPVPQCGPGCYESQGRILASIVGRPHRDGAVVSVIGKAEAGV
VPEIGSIVGYPLLVCAASSNTQIARLSPQQAHVVIQIVNDRPVADSTEELTGVVKMGECF
RLGDIVKAKVVSHALVLFCSSPQLSLGDARSYYLSTAANELGVVYATSEDGEHPPSQPVP
LTTRQPAPSHLVPGDGGPPDGPHRAAQGRQT
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccgctactcctcccgggacaaccgctaccagcagcattcacaatacctcca
gtgccgcagtgcggtccaggctgttatgagagccagggccgtattctcgccagcattgtc
gggcggccacaccgcgatggagcagtcgtcagcgtcattggcaaggccgaggcgggtgta
gtgccagaaatcgggagcattgttggttaccctctcctggtttgcgcggcgagctctaac
acccagattgcgcgcttgtcaccgcagcaggcgcacgtcgtgattcagatcgtcaacgac
cgccccgtcgccgactctacagaggagctgacaggcgtcgtcaagatgggcgagtgcttc
cgcctcggcgacattgtcaaggccaaggtcgtaagtcacgccctcgttctgttctgtagc
tcaccccagctctccctcggcgacgcccgcagctactacctctccacagccgccaacgag
ctcggtgtcgtgtacgccacctccgaggacggtgagcaccccccttcccagccagtaccg
ctgaccaccaggcaacccgctccttcccatctcgttccaggagatggaggacccccagac
gggccgcacagagcggcgcaaggtcgccaaacctga
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