Trichosporon asahii var. asahii: A1Q1_04328
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Entry
A1Q1_04328 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1Q1_04328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_04328
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
A1Q1_04328
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
A1Q1_04328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
25987841
NCBI-ProteinID:
XP_014178180
UniProt:
J5SQB1
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MALRKLQTEIDRTLKAVAQGVETFEATFDKLNHASNATQKDKLENDLKTQIKKLQRMRDQ
IKVWLGSSDIKDKSALLENRKLIETQMERFKALEKEMKMKAFSKEGLIAAARLDPAEKAR
RDIIDWIVSTIDELSRQIEQTEAEAEQLQASGKKKKAMGDRLSELDQLNERRQWHIGRLE
IVQRMFENGQINNEQVEMIQEDVKYFVEANTEEDFDFDLGIYDELNLQEGEEDYNADYGA
HGHEDSSNIDTNSVADTAETPSKSSKADKKSKDHSDDTPPSPVQTKRSEKKKAEKEARKE
AERQEKAEKAAAEAAAKAEAAAKAKAAAEAAASPPPAQPKAPLPPIRYAAAAAAAVGGSH
PAPPSETSSSKKDKDTTSEEPAHPEPEPSPMASSSAAEPSNGQPTTTSATSATPSPAPET
SVNGQQQPPAESSRAPSTSYSTSPRKEQGVLENLMASFGVAKDMAERRGADPNELVSQLD
VSYHNAPAQLDAEPPRYYHPHSPIQTPSYYPQTRLPQLEDKSIYQRLELDQLFYIFYYMT
GTYEQWLAAQELKRQSWRFHKQYLTWFQRAHNPQAITEDYEQGGYYYFDWENSWCQRRKS
DFRFEYRWLSDH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagaaaactgcagaccgagatagaccgaacgttgaaggccgtcgcccagggc
gtcgagacctttgaggcgacgtttgacaagctgaaccatgcgtcaaatgcgacgcaaaag
gacaagctcgagaacgacctcaagacccagatcaagaaactgcagcgcatgcgtgatcag
atcaaggtctggctcggaagttcggacatcaaggacaagagcgcacttctagagaaccgc
aaactgatcgaaacacaaatggagcggtttaaggctctcgagaaggaaatgaaaatgaag
gccttctcgaaagaggggctaatcgccgccgcccgactagacccggcagagaaggcgcgc
cgcgacattatcgactggattgtgtcaacaatcgacgagctctcccgccaaatcgagcag
acggaagctgaggctgagcagctgcaggcttccggaaagaagaagaaggccatgggagat
cgtctcagcgagctcgaccagctgaacgagcgtagacaatggcacattggacggctcgag
attgtccagcgcatgttcgagaacggccagatcaacaatgagcaggtcgagatgatccag
gaggacgtcaagtacttcgtggaggccaacaccgaggaggactttgactttgacctcgga
atctacgacgagctcaacctccaggagggcgaggaggactacaacgccgactacggagca
cacggacatgaggactcgtccaatattgacacgaattccgtcgccgacaccgccgagacg
ccatccaaatcgtccaaggcggacaagaagtcgaaagatcattctgacgacacgcctcca
agccctgtgcagactaagcgcagcgagaagaagaaggctgaaaaggaagcccggaaagaa
gccgagaggcaggagaaggctgagaaggctgccgccgaggctgctgccaaggccgaggcc
gccgccaaggccaaggctgctgctgaggctgccgcttccccgccaccggcacagcccaag
gctcctctgccgccaatccgttacgccgccgccgctgccgcagcagtcggaggatcacat
cccgcgcccccgtctgagacgtcatcgtcgaagaaggacaaagacacgacttctgaggag
cccgcgcaccccgagccggagccgtcacctatggccagcagctctgccgccgagccgtca
aacggacaacccacgacgacgtctgccacgtccgccacgccgtcacctgcgcccgagacc
tctgtcaacggtcagcagcagcctccggccgagtcgtctcgtgcgccttcgacgtcctac
tccacatctccgcgcaaggagcagggtgtcctcgagaacctgatggcctcgttcggtgtg
gccaaggacatggccgagcgccgcggagccgacccgaacgagctcgtgtcgcagctcgac
gtgtcgtaccacaatgcccctgcgcagctcgacgccgagccgccgcggtactaccacccg
cacagcccgatccagacgccgagctactacccgcagacgcgcctgccgcagctcgaggac
aagagcatctaccagcgcctcgagctggaccagctcttctacatcttctactacatgacg
gggacgtacgagcagtggctcgcggcgcaggagctcaagcgccagtcgtggcgcttccac
aagcagtacctcacgtggttccagcgcgcgcacaacccgcaggccatcaccgaggactac
gagcagggagggtactactactttgactgggagaactcgtggtgccagcgcaggaagagc
gacttccgcttcgagtacaggtggctctctgaccattag
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