Trichosporon asahii var. asahii: A1Q1_04908
Help
Entry
A1Q1_04908 CDS
T06566
Name
(RefSeq) pre-rRNA processing protein associated with U3 snRNP, Rrp9p
KO
K14793
ribosomal RNA-processing protein 9
Organism
tasa
Trichosporon asahii var. asahii
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tasa03009
]
A1Q1_04908
Ribosome biogenesis [BR:
tasa03009
]
Eukaryotic type
90S particles
Other 90S particles
A1Q1_04908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_DCAF12
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
25988420
NCBI-ProteinID:
XP_014177190
UniProt:
J5SMM5
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MPDAFFKSDKKRKRSRNGGGGGGPSRGGPRDDMPSRGRGRKQQKEDEDLSDTGDELDIDD
MDFQKDRAPHIMSDDEFVDANETAAEKRVRLARGYLDKVARDVQQAREEDDYDAADIDRE
LIASRLKQEVDEAEGRIHMFYSSASASNPRFKALGAVPTGVGMVLSKPKSSSDGKVTGVE
AIYVSTKGGVQRLDPGLKNAPLHSTEGGHQGPVLCMAASEDGKWLVTGGQDRVIGVAPAA
EQPDIPPPLCLSLAPPGTALALDALATGDLLWTPGLDPERLGAEADDVEEEVQLVLRAGG
KTRTPEGEWVEGSVDVVTMLDDSHFVSGGDTGSIALWSTGKKKPLFTHVLAHGTDSEGHN
LLPSETGPKPRWITALAHLRGSNLFASGSWDGEIKFWKIDSELKRFEEAGSVNVKGFVNA
IQILNTPKGIRLVAAVGREPRLGRWVTVKARNGVFVADVELEK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgccttcttcaagtcggacaagaagcggaaacgtagccgcaacggtggcggc
ggtggcggcccgtcgcgcggcgggccgagggacgacatgccctctcgcggacggggacgg
aagcagcagaaggaagacgaggacctgagcgacactggcgacgagctcgacatcgacgac
atggacttccagaaggaccgcgcgccgcacattatgtccgatgatgagtttgtcgatgcc
aacgagacggcggccgagaagcgtgtccgtctcgcgagggggtatctcgacaaggtggcc
cgggacgtgcagcaggcgcgggaagaggatgactacgatgcggccgacattgaccgtgag
ctgatcgcgtcccgactcaagcaggaggtggacgaagccgagggccgcatccacatgttc
tactcgtccgcctcggcctcgaacccgcggttcaaggcgctgggcgccgtcccaacgggc
gtgggcatggtgctctccaagccgaaatccagcagcgacggcaaggtgacgggcgtcgag
gcgatctacgtgtcgacaaagggcggcgtgcagcgtctcgacccgggattgaagaatgcg
ccgctgcactcgacggagggaggacatcagggccccgtgctgtgcatggccgcgagcgag
gacggcaagtggcttgtgaccggaggacaggaccgggtcattggcgtcgctcccgccgct
gaacaacccgacataccacctcctctctgcctctctctcgcgccacctggcactgcactc
gctctcgacgctctcgccactggagaccttctatggacaccaggactcgatcccgagcgt
ctcggcgctgaagccgacgacgtcgaggaggaggtgcagctcgtcctccgtgcgggcggc
aagacgcgtacgcccgagggcgagtgggtcgagggatccgtcgatgtcgtgacgatgctc
gacgactctcacttcgtgtccggcggggatactggcagcatcgcgctctggagcacgggc
aagaagaagcctctcttcacccacgtcctcgcccatggcaccgacagcgaggggcacaac
ctcctcccgtccgagacggggccgaagccgcgctggatcactgctctcgctcatttgcgg
ggaagtaaccttttcgcatccggaagctgggacggcgagatcaagttctggaagattgac
agcgagctcaagcgtttcgaggaggccggcagcgtcaatgtcaaggggttcgtgaacgcc
atccagatcctcaatacccccaagggtatccggctcgtggctgctgttggacgcgagccc
cgcctcggccgctgggtcactgtcaaggcgcgcaatggcgtgtttgtcgccgacgtcgag
ctggagaagtaa
DBGET
integrated database retrieval system
